| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2908 |
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| Symbol | |
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| ID | 1042832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3306900 |
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| End bp | 3307595 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637146330 |
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| Product | DNA-binding transcriptional regulator CsiR |
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| Protein accession | NP_745052 |
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| Protein GI | 26989627 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00158542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAGCGC TCGCCCCCCG ACAAAACTCA GCATTCAGCG GGTATGAGAG GCTCAAGAAG
GACATCATCC GCGGGGTGTT CAAGCCCGGT GAAAAGCTGT TGATGAGCAC CCTCAAGGAA
CGCTACGACC TGGGTGTGGG CCCGCTGCGC GAAGCACTGT CGCAACTGGT GGCCGAGCAC
CTGGTCAACG CGATCAGCCA GAAAGGCTAC CGGGTAGCGC CCATGTCGCT GGATGAGATG
AACGACATCT ACGACGCCCG CGCCAACCTG GAAGCGATGA TCATTGCCTT GGCCATCGAG
CGCGGCGATG ACGCCTGGGA GGCATCGGTG CTGGCCCACT CGCATACATT GGCCAAGGTG
GTGGAAGTAA AAACCCGCGA GCAGCGGCTG GATGTGTGGG ACGAGCGGCA CAAGGCGTTC
CATACTGCCA TTGCCTCGGG CTGCGGCTCC AAGCACCTGC TGCAGGCACG CACCTACCTG
TTCGACCAGG CCGAGCGCTA CCGCCACCTG TGGCTGACGC AGACGGTGTT TTCCGAAGAG
GCGCTGGCGC TCAAGCGCCA GGAGCATGCG GCACTGGTCG AGGTGATCCT CGCCCGGGAT
GCCAAAACCG CCAGCGCCAT GATGCGCTCG CACCTGATGA CACCGGTACC GATCATTGCG
CAGATCATGC ACGCCGAAGG CATCGGTGCC CGCTAG
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| Protein sequence | MEALAPRQNS AFSGYERLKK DIIRGVFKPG EKLLMSTLKE RYDLGVGPLR EALSQLVAEH
LVNAISQKGY RVAPMSLDEM NDIYDARANL EAMIIALAIE RGDDAWEASV LAHSHTLAKV
VEVKTREQRL DVWDERHKAF HTAIASGCGS KHLLQARTYL FDQAERYRHL WLTQTVFSEE
ALALKRQEHA ALVEVILARD AKTASAMMRS HLMTPVPIIA QIMHAEGIGA R
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