| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2892 |
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| Symbol | |
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| ID | 1042821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3288966 |
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| End bp | 3290717 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637146314 |
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| Product | surface antigen (D15) |
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| Protein accession | NP_745036 |
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| Protein GI | 26989611 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.126933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.939867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCA TGACGTATTC AGGAAGATTG ACCTGGGGCC TGGTATTCTG GGTCGCCAGT
TTCGCAGCAT GGGGCCAGAG CGAGTTGTTG GTGAAGGTGA AACCGGCCAA CAAGGCGCTC
AAGGCCAATG TCGAAGGCTA TATAGGCACA TTGGGTGACC GCGACGAAGA AGCACTTTTA
CGCTTCAGTC GCGGGGCAGA GGAGCAGGCG CGCAAAGCGG CGCAGGCACT CGGCTACTAT
CAGGCGCAGA TCGATACCGA GGTCAAGCCC GCCAGCGACG CAGACCATCC CCCAAAACTG
ATCATCAGCA TCAACCCGGG CGAACCGATT CGCCTGCGCA ACGTGACCGT GCGCATCGAG
GGCCCAGCCA GCGAGATGAA GGCCTTCCGC GTGCCTGACA GCAAGGCGCT GCGGCCGGGT
GAACAACTCA ATCACGGCCA TTACGAGGAT GCCAAGCGGT TGATCCAGAA CCAGGCGTCG
CGCTATGGCT TCTTCAGTGG GCGCTTCAGT AGCCAGCGCC TGGCCGTCGA CCCGCAAGCC
GGTGTGGCGG ATATCGAACT GGTCTACCAG AGTGGCCCGC GTTATCGCCT GGGCGCCGTC
ACCTTCGGTG GCGACACACC GCTGGACGAG GACCTGCTGC AGCGCATGGT GTCGTTCAAG
CCGGGTACCC CTTACGACTC GGAACTGGTC GCAGAGCTGA ACAACGACCT GCAATCGAGC
GGCTATTTCG AAGGCGTGCG CGTGGATGCG GCGCCCACTG CTGCTGTGGG CGAAGAAGTC
CCGGTGGATG TTCATCTGGA AACCCGTAAA CCACGCACCA TGGGCCTTGG CCTGGGCTTC
TCGACCGACG TCGGGCCGCG CGGCAAGGCC AACTGGACCC GCCACTGGGT CAACCCACAA
GGCCACAGCT ATGGCTGGGA AACCGAACTG TCGGCCCCGC GCCAGAACGT CGGCCTGTGG
TATGACATTC CCCTCGACCC GCCGCTGACC GACAAGTTGC GCTTTGCCGG CGGCTACCAG
AACGAGGAGC TTGCCGGCAC CGACACGCTC AGCAAGCTGT TGACGGTCGG CCCCGAGTGG
CACAGCAAGC TGCCCAGTGG CTGGCAGCGG GTGATTTCGC TCAAGTACCA ACGCGAAGAA
TATCGCCTGG GTGACGACTC CGGTTTGAGC AACCTGCTGA TGCCGGGCGT CAGCTTTTCC
TTCCTGCGCA GTGACAACCG TATCGATCCG CACAACGGCT ATCGCCTGCA GTTCGATGTT
CAAGGTGCCA AGGAAGGGCT GGTGTCCGAC ACCAACCTGC TGCACGGCAA CGTATTGCTC
AAAGGCCTGA CCACACTCGG CCACAACCAC CGCTTTCTCG GACGCGTACA GTTTGGTGGC
AGTGCAACCA ATGGCTTCAA GAACAACATT CCGCCGTCGC TGCGTTTCTT CGCGGGTGGC
GACCAGAGTG TGCGCGGTTA CGACTACCAG ACCCTGTCGC CGAAGAACAG CGACGGTGAC
CGTATCGGCG GGCGCTACTT GGTGGCAGGC AGTGTCGAGT ACCAGTATTC GCTGACCGAA
AAATGGCGGG TCGCGACGTT CGTCGACCAA GGCAACTCGT TCAACGACCT GGAGCTGCCC
AGCCTCAAGA CCGGTGTCGG CTTTGGTGTG CGCTGGGTAT CGCCAGTCGG GCCGCTGCGC
CTGGACCTGG CCAAGGCGCT GGATGACGAA GGGGGCATTC GCCTGCACTT TTCCATGGGG
CCCGAGCTGT GA
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| Protein sequence | MRRMTYSGRL TWGLVFWVAS FAAWGQSELL VKVKPANKAL KANVEGYIGT LGDRDEEALL
RFSRGAEEQA RKAAQALGYY QAQIDTEVKP ASDADHPPKL IISINPGEPI RLRNVTVRIE
GPASEMKAFR VPDSKALRPG EQLNHGHYED AKRLIQNQAS RYGFFSGRFS SQRLAVDPQA
GVADIELVYQ SGPRYRLGAV TFGGDTPLDE DLLQRMVSFK PGTPYDSELV AELNNDLQSS
GYFEGVRVDA APTAAVGEEV PVDVHLETRK PRTMGLGLGF STDVGPRGKA NWTRHWVNPQ
GHSYGWETEL SAPRQNVGLW YDIPLDPPLT DKLRFAGGYQ NEELAGTDTL SKLLTVGPEW
HSKLPSGWQR VISLKYQREE YRLGDDSGLS NLLMPGVSFS FLRSDNRIDP HNGYRLQFDV
QGAKEGLVSD TNLLHGNVLL KGLTTLGHNH RFLGRVQFGG SATNGFKNNI PPSLRFFAGG
DQSVRGYDYQ TLSPKNSDGD RIGGRYLVAG SVEYQYSLTE KWRVATFVDQ GNSFNDLELP
SLKTGVGFGV RWVSPVGPLR LDLAKALDDE GGIRLHFSMG PEL
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