| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2889 |
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| Symbol | |
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| ID | 1042811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3286504 |
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| End bp | 3287256 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637146311 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | NP_745033 |
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| Protein GI | 26989608 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00655403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.801415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGC TGATCCCCAG CGATGATGAA TTGCACGCTT TCGTCGATGA ACGCCTGGAA
CCTGTGCGCC GGGCCGAGGT GCAGGCCTGG CTGGCGGCCA ACCCGCAAGC TGCGGCACGG
GTGGAAGGCT GGCGCGCCGA TGCCCGAAGG CTGCGCACAG CGCTGGCCGG GTTGGGCGAG
CTGCCCGGTG CGGCGCAGCT GGACCTTGGC CAGTTGCGTC GGCAATTGCG CCAGCGTCGG
CAGCGGCGCT GGGCTGCGGC GGCGGTAGTG ATGCTGGCGT TGGGTGTGGG GGGCTTGGGC
GGCTGGCAAG TGCGCGATGC AACCCTGGCG CGGGTCGACC TGCCCATGGC TGATGCTGTT
CAGGCGCACC GTCTGTTTGC CGGCAGTGAA GCACTGGATA TCCAGGCCAG TGATCCTGGG
CAGTTGCGCG ACTGGCTGGG CCGCCATTTC AGCCGGGTGG GCCAGTTACC GGACCTGGCG
GGATATGGCT TCAAACCGGT GGGCGCGCGC TTGCTCAGCA ACGAGCAGGG GCCGGCTGCA
TTACTGGTAT TCGAAGATGG CAAGGGCCAG CGCATCAGCC TGTTCCTGCG CTCGCCGGGC
AACCTTTATC GGCGCATGCC GGACGGGCAG CGGGTCGATG GCCAGCTGGA GGCGCGGTAC
TGGTCGCATG GGGCTTATAA CTTTGCCTTG GTCAGCGCGG CGGACGATGT GCGTGGGGCG
GGGGTGGGGG AGGCGTTGAG GTTGGGGTTG TAA
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| Protein sequence | MTRLIPSDDE LHAFVDERLE PVRRAEVQAW LAANPQAAAR VEGWRADARR LRTALAGLGE
LPGAAQLDLG QLRRQLRQRR QRRWAAAAVV MLALGVGGLG GWQVRDATLA RVDLPMADAV
QAHRLFAGSE ALDIQASDPG QLRDWLGRHF SRVGQLPDLA GYGFKPVGAR LLSNEQGPAA
LLVFEDGKGQ RISLFLRSPG NLYRRMPDGQ RVDGQLEARY WSHGAYNFAL VSAADDVRGA
GVGEALRLGL
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