Gene PP_2884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2884 
Symbol 
ID1042808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3282365 
End bp3282910 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content63% 
IMG OID637146306 
ProductXRE family transcriptional regulator 
Protein accessionNP_745028 
Protein GI26989603 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0819457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.480487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGG GGACGCGACT CAAACTGGTG CGTGAACGCA ACAACCTCTC CCAACGGGAA 
CTGGCCCGTC GCAGCGGGCT GACCAATTCG ACGATCTCGC AGATCGAGCA GAATCGCGTC
AGCCCTTCGG TCAGCTCCCT GAAAAAACTG CTCGAAGGCA TTCCCATGAG CCTGGCGGAG
TTTTTCAGCT TCGACGAGCC GGTGCGTGAG GAACGCTACG TATTCCGTGG TGGCGAACAA
CCCGACCTGG GCCGCAATGG CCTGCGCATG CTGCTGGTCG GCGCCAGCGT CGAAGGCCGC
CAAATGCGCA TGCTGCGTGA GCTGTACGCA CCCGGCGCCG ACTCTGGCGA GCCGATCGTG
CACGCTGAAG GCGAAGAATG CGGGTTGGTC ACCCGTGGCA CCGTCGAGCT GTGGGTCGAC
GGCCAGGTCA GCGTGCTCAA TTCGGGCGAC GGCTACTACA TCCCCACGAC CCTGCCGCAC
AGTTTCAAGA ACATCGGCCC GGATGAGGCC GAGATCATCA GCGCCAACAC GCCGGCGAAT
TTCTGA
 
Protein sequence
MDTGTRLKLV RERNNLSQRE LARRSGLTNS TISQIEQNRV SPSVSSLKKL LEGIPMSLAE 
FFSFDEPVRE ERYVFRGGEQ PDLGRNGLRM LLVGASVEGR QMRMLRELYA PGADSGEPIV
HAEGEECGLV TRGTVELWVD GQVSVLNSGD GYYIPTTLPH SFKNIGPDEA EIISANTPAN
F