Gene PP_2882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2882 
Symbol 
ID1042791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3281476 
End bp3282090 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content63% 
IMG OID637146304 
ProductDSBA oxidoreductase 
Protein accessionNP_745026 
Protein GI26989601 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.47421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.700762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACGT CTGTCGATTT CTTTTTTGAC CTGGGTAGCC CGGCCAGCTA CCTGGCCTGG 
ACCCAACTGC CGAACCTGTG TGCCCGCCAC GGCGCTACGC TGCGCTACCG GCCAATGCTG
CTTGGCGGGG TTTTCCAGGC TACCGGCAAT GCTTCGCCGG CCATGATCCC GGCCAAAGGG
CGCTACATGT TCACCGACCT GGCCCGCTTT GCCGAACGCT ACGGTGTGCC GTTCGGGATG
CCGCCGGGCT TCCCGGTCAA TACCCTGACG TTGATGCGCG GCGTGACAGG GACCCAGTTG
CGTTCACCGG ATCGGTTCGA GGCATTGCTA TCGGTGCTGT TCACTGGGCT ATGGGTACAG
CGCCGCAACC TGAGCGACAG CGCTGTGCTG AATGAAACAC TCGCGCAGGC AGGCTTCGAC
CCACAGGTTT TTCATGCCCT GGCCGCTGAC AGCGAAGTAA AAGCAGCGCT AAAGCACGCG
ACCGAGGCCG CTGTGGCGCG CGGGGTGTTT GGCGCGCCCA CCTGTTTTGT CGGTGACGGG
ATGTTCTTCG GCCAGGACCG CCTGGACTTT GTCGAGGAGG CGCTACGTCA GGGGGCCAGC
AGCCTCTCCA GCTGA
 
Protein sequence
MHTSVDFFFD LGSPASYLAW TQLPNLCARH GATLRYRPML LGGVFQATGN ASPAMIPAKG 
RYMFTDLARF AERYGVPFGM PPGFPVNTLT LMRGVTGTQL RSPDRFEALL SVLFTGLWVQ
RRNLSDSAVL NETLAQAGFD PQVFHALAAD SEVKAALKHA TEAAVARGVF GAPTCFVGDG
MFFGQDRLDF VEEALRQGAS SLSS