Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2871 |
Symbol | |
ID | 1042763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3273322 |
End bp | 3274077 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637146293 |
Product | aldolase II superfamily protein |
Protein accession | NP_745015 |
Protein GI | 26989590 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAA CGGAACTAAG CCTGCGTCGG GAGCTGGCTG CCTGCTACCG GCTGATCGCG CACTTTCGCA TGAGCGATCT CATCTTCACG CATATCTCTC TGCGCCTGCC TGGGCCGGAG CACCATTTCC TGATCAACCC GTACGGCCTG CTCTTCGAGG AGATCACAGC GTCCAGCCTG GTGAAGATCG ACCTGCAGGG GCGGCCGGTG GGGGCTGCCT GTCATCCGGT CAACCCGGCC GGGTTCGTCA TTCACAGTGC CATTCACGCT GCCCGCGAGG ATGCCCGGTG CGTGCTGCAC ACCCACACCC GCGCAGGCTG CGCGGTGGCC GCATTGGAAT GTGGCCTGCT GCCGGTCAAC CAGATGTCCA TGGAGTTTTA CGGCAATGTG GCTTACCACG CCTATGAGGG CGTCGCGCTG GACATGGATG AACAGCAACG GCTGGTGGCC GACCTGGGCA ACAAGCCGGT GATGATGCTG CGCAACCATG GGCTGTTGAC CACGGGGCGC AGTGTGGCTG AAGCCTTCTT GCGCATGTAC TACCTGGAGA AGGCTTGCGA GATCCAGTTG GCGGCACAAA GTGCTGGGCA ACTGATATTG CCGTCGACCG AAGTGTGCGT GCGTACCGAA CGGCAGTTCA ACGCGCCGGG GAGAGGGTTG AAGCAGGGGG AACTGACCGA CCCGGATGCG CTGCACTTGG CGTGGGCGGC GTTGTTGCGA ATGTTGGAAA AGGTGGCGCC TGGTTATCTG GATTGA
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Protein sequence | MTETELSLRR ELAACYRLIA HFRMSDLIFT HISLRLPGPE HHFLINPYGL LFEEITASSL VKIDLQGRPV GAACHPVNPA GFVIHSAIHA AREDARCVLH THTRAGCAVA ALECGLLPVN QMSMEFYGNV AYHAYEGVAL DMDEQQRLVA DLGNKPVMML RNHGLLTTGR SVAEAFLRMY YLEKACEIQL AAQSAGQLIL PSTEVCVRTE RQFNAPGRGL KQGELTDPDA LHLAWAALLR MLEKVAPGYL D
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