Gene PP_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2871 
Symbol 
ID1042763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3273322 
End bp3274077 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID637146293 
Productaldolase II superfamily protein 
Protein accessionNP_745015 
Protein GI26989590 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA CGGAACTAAG CCTGCGTCGG GAGCTGGCTG CCTGCTACCG GCTGATCGCG 
CACTTTCGCA TGAGCGATCT CATCTTCACG CATATCTCTC TGCGCCTGCC TGGGCCGGAG
CACCATTTCC TGATCAACCC GTACGGCCTG CTCTTCGAGG AGATCACAGC GTCCAGCCTG
GTGAAGATCG ACCTGCAGGG GCGGCCGGTG GGGGCTGCCT GTCATCCGGT CAACCCGGCC
GGGTTCGTCA TTCACAGTGC CATTCACGCT GCCCGCGAGG ATGCCCGGTG CGTGCTGCAC
ACCCACACCC GCGCAGGCTG CGCGGTGGCC GCATTGGAAT GTGGCCTGCT GCCGGTCAAC
CAGATGTCCA TGGAGTTTTA CGGCAATGTG GCTTACCACG CCTATGAGGG CGTCGCGCTG
GACATGGATG AACAGCAACG GCTGGTGGCC GACCTGGGCA ACAAGCCGGT GATGATGCTG
CGCAACCATG GGCTGTTGAC CACGGGGCGC AGTGTGGCTG AAGCCTTCTT GCGCATGTAC
TACCTGGAGA AGGCTTGCGA GATCCAGTTG GCGGCACAAA GTGCTGGGCA ACTGATATTG
CCGTCGACCG AAGTGTGCGT GCGTACCGAA CGGCAGTTCA ACGCGCCGGG GAGAGGGTTG
AAGCAGGGGG AACTGACCGA CCCGGATGCG CTGCACTTGG CGTGGGCGGC GTTGTTGCGA
ATGTTGGAAA AGGTGGCGCC TGGTTATCTG GATTGA
 
Protein sequence
MTETELSLRR ELAACYRLIA HFRMSDLIFT HISLRLPGPE HHFLINPYGL LFEEITASSL 
VKIDLQGRPV GAACHPVNPA GFVIHSAIHA AREDARCVLH THTRAGCAVA ALECGLLPVN
QMSMEFYGNV AYHAYEGVAL DMDEQQRLVA DLGNKPVMML RNHGLLTTGR SVAEAFLRMY
YLEKACEIQL AAQSAGQLIL PSTEVCVRTE RQFNAPGRGL KQGELTDPDA LHLAWAALLR
MLEKVAPGYL D