| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2870 |
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| Symbol | |
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| ID | 1042778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3272199 |
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| End bp | 3273299 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637146292 |
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| Product | PotD/PotF family extracellular solute-binding protein |
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| Protein accession | NP_745014 |
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| Protein GI | 26989589 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCAG AACAACAAGA AAACGGGCCC GTCGGGCACC GCCAGGAGGA AACTACGATG
CAGCTATATC CACGTGTGAC CGGCCTTTGT GCAGCCTTGT TGGCCCTTGG CCTGAGCAAT
GCGCAAGCTG CGCAGCAGAT GGTCGTGGTC GGTTATGGCG GTGCGGGCCA GAAGGCCCAG
GATGAGGCGA TCTTCAAGCC CTTCGTTGCC CAGGACGGCA GCCAGCTGAT CCAGAGTGAA
TACAACGGCG AAATGGCACG GATCCAGGTC ATGGCCGACA CCGGGAATGT CGATTGGGAC
GTGGTGCAGA TCGAAGGCCC TGACTTGATG CGCGGCTGCG ACGAGGGGAT TTACGAGCGC
CTGGATTGGC AGCGCCTGGG CCATGCAGCC GAACTGATCC CGGCAGCCGC ACAAGATTGT
GGGTCGGCCG CGCTGGTCTG GAGCGTGGCT ATTGCCTACG ACCGCAGCAA ACTGGCCCAG
GCGCCGGCGT CGTGGGCCGA CTTCTGGGAC GTCGACAAGT ACCCTGGCAA GCGCGGCCTG
CGCAAACGTG CGGTGTACAA CCTGGAATTC GCGCTGTTGG CTGACGGGGT CAAGGTCGAG
GACGTATACC GGGTATTGTC CACGCCGGCA GGTGTCGAGC GGGCCTTCGC CAAACTCAGT
GAACTCAAAC CCCATATCCA GTGGTGGGAC GCCGGCGCTC AACCCGCGCA ATGGCTGGCA
GCCGGTGACG TGGTCATGAC CTCCACCTAC AGCGGACGAA TTGCGGTGGC GGCGCAGCAG
GGCAGCCCGT TGGCCGTGGT ATGGCCTGGC AGCCTGTACG GTATGGACTA TTGGGCGATC
ATCAAAGGCT CGCGGCATGT CGACCAGGCC AAGCGGCTGA TTGCCTATGC CAATCAGCCG
GATACCCAGG TGCGGTATGT GCAGCAGATA CCCTATGGGC CAACCAATAC CCAAGCCGCG
GCCAGGCTTG ACCCGGCGCT GGCCAACTGG GTACCCACTT CGCCACAGAA CCTGCAAGGG
GCGCTGGCCA TGAACGTGGA ATTCTGGGTC GATCATGGCG AAGAACTGGA GCAACGCTTC
AATGCCTGGG CCAGCAAATA G
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| Protein sequence | MTSEQQENGP VGHRQEETTM QLYPRVTGLC AALLALGLSN AQAAQQMVVV GYGGAGQKAQ
DEAIFKPFVA QDGSQLIQSE YNGEMARIQV MADTGNVDWD VVQIEGPDLM RGCDEGIYER
LDWQRLGHAA ELIPAAAQDC GSAALVWSVA IAYDRSKLAQ APASWADFWD VDKYPGKRGL
RKRAVYNLEF ALLADGVKVE DVYRVLSTPA GVERAFAKLS ELKPHIQWWD AGAQPAQWLA
AGDVVMTSTY SGRIAVAAQQ GSPLAVVWPG SLYGMDYWAI IKGSRHVDQA KRLIAYANQP
DTQVRYVQQI PYGPTNTQAA ARLDPALANW VPTSPQNLQG ALAMNVEFWV DHGEELEQRF
NAWASK
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