Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2853 |
Symbol | |
ID | 1042744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3255870 |
End bp | 3257150 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637146275 |
Product | hypothetical protein |
Protein accession | NP_744997 |
Protein GI | 26989572 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.570467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACCGAT CTTTTACGCT CCGAGCTTTT GTGTGCTTGA CGACCTTGGC CCCCGCCACC GCACTTTACG CAGCCGCCGA CCCACAAGTC GAAGCGCTGA GGCAGGAACT GATTGAACTC AAACGCCGCT ATGAGGCACA GCAACAGGCA CTGATGGTGC TGGAGCAACG TGTGCGCCAG GTCGAGGAGG CCCCTGCTGC CGCGCAACCC AAACGCTTGG TCAAGTCTCC GGCCGAGGGG GTGAAAGGTG CTCAGACCGT CGCTTCTGGC GCACCGGGCA CTACAGGGAG CTCCTACGGC CAGGCGCTGA CAGCCGATTC CGAGCCGGCG CAAAGCGTTT CCAACCTGTA TGACGAAGCC AGCGGATTCT TTGGCGGGGG CAAGTTCAGC TTCGAAACCG GCGTCACCTA TACCCATTAC GATACCCGTG CGCTAACCCT CAATGGCTTT CTGGCACTGG ACTCGATCTT CCTCGGCAGC ATCAACCTCG ACCGGATCAA GGCTGACAAC TGGACCTTGG ACATGACTGC CCGCTATAAC CTGGCGCAGC GCTGGCAGTT CGACATCAAC GTCCCCGTAG TTTACCGCGA GTCCACCTAC TCGTCCGGTG GTGCGGGGGG GGCCGGGGCA ACCACTTCCG ATGCCAGCGT GACCCGCGAC CCGGAAATCG GCGATATCAA CGTCGGGGTG GCCTACAAAT TCCTCGACGA GGACGAAACC TGGCCTGACG CAGTGGCCAC CCTGCGCATC AAGGCACCGA CCGGCAAAGA CCCCTACGGC ATCAAACTGC GCGAGGTGGA CGGCAACAAC AACCTCGCGG TACCGGAAAG CCTACCGACC GGCAACGGTG TATGGTCGAT CACACCGGGC ATCTCGCTGG TCAAGACCTT CGACCCGGCC GTGCTGTTCG GCAGCCTGTC CTACACCTAC AACATGCAAG ACTCGTTCAG CGACATCAGT CCGCAGGTGA ACAGCAAGGT ACCGGGTGAC GTCAAGCTTG GCGACTCGTG GCAGATCGGC GGGGGCATCG CCTTTGCCCT TAACGAAAAG ATGAGCATGT CGTTCTCGGT ATCCGACCAG TTCGCCCGCA AGAGCAAGAT CAAACCTGAT GGCGGCGACT GGCAATCGAT CTCCAACAGT GACTACAACG CCGCCAACTT CAATATTGGC CTGACCTTCG CCGCCACCGA CAACCTGACC ATCGTGCCCA ACCTGTCCAT TGGTCTGACC GATGACGCAC CTGACTTTTC TTTCAGCCTG AAATTCCCTT ATTACTTCTG A
|
Protein sequence | MYRSFTLRAF VCLTTLAPAT ALYAAADPQV EALRQELIEL KRRYEAQQQA LMVLEQRVRQ VEEAPAAAQP KRLVKSPAEG VKGAQTVASG APGTTGSSYG QALTADSEPA QSVSNLYDEA SGFFGGGKFS FETGVTYTHY DTRALTLNGF LALDSIFLGS INLDRIKADN WTLDMTARYN LAQRWQFDIN VPVVYRESTY SSGGAGGAGA TTSDASVTRD PEIGDINVGV AYKFLDEDET WPDAVATLRI KAPTGKDPYG IKLREVDGNN NLAVPESLPT GNGVWSITPG ISLVKTFDPA VLFGSLSYTY NMQDSFSDIS PQVNSKVPGD VKLGDSWQIG GGIAFALNEK MSMSFSVSDQ FARKSKIKPD GGDWQSISNS DYNAANFNIG LTFAATDNLT IVPNLSIGLT DDAPDFSFSL KFPYYF
|
| |