| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2838 |
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| Symbol | |
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| ID | 1042739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3240302 |
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| End bp | 3241951 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146260 |
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| Product | VRR-NUC domain protein |
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| Protein accession | NP_744982 |
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| Protein GI | 26989557 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.717913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCCC ATTCCGTCGA CGACCCGTTC TACTACCTGC ATAACTTCCG CCAGGTCGTG
CTGTGGGTCG AACAGCGCTA CCAGGACCTG CTGGATGACC AGGAACTGGC CTTCATCCGT
GCCTTCAGTC AACTGCAAGC GCCAGCCCAG GCCTTGATGG TGCGCATGGT GATGCGCAAA
GGCGAGTTGT TTCGCAGCGA TCGGCTCGAC TACGCCGAAA TCGGCGATAC TGCGCTGGCG
CTGCAGCCGT TGCTGGCCCT CGGCTGGGTA CGGGAGCCCG AGCAACTGGA CCTTGAGCAG
CTGTTCGCGT TGCTGCGCAA GGAAGAACTG GCCCGCTGCT TCGCCCGGCA ACTGAACCGC
CCGCGCGCGG CCAAGCATGA GTTGTTGGCA CAGCTGCAAC CCCTGGCGCT GGCAGCCCGG
TCACTGGTCG AATGGTTTCC TGACAGCGAT GTGCGCATCC TCCAGTGGTG CCTGCAACCT
TTGTGCGACC GCATACGCCT GCTGTTTTTC GGCAACCTGT ACCAGGACTG GTCAGACTTC
GTCCTCGCCG ACCTGGGCTT GCTGCGTTAC GAGCAGGTGC CGTTCAGCCC TGATTCGCGT
GCCTTGCAGC AACGTGACGA TGTCGACCTG GCCATGGCGC TGCACCATTG CGCCGAGCGC
CTGGAGCAGG GCGGCGACCC CCTGCCGATC CTTGCCACCC TGCAGGGCCT GCACAGCAGC
AACCCCTGGC TGGCCCGGCG CCATGCGCGG CTGCAATTCG CCGTGGGCCA ACAATGCGAG
CGGCTGGGTG AATGGGACCT GGCCACGGCG GTGTATGCGC AATGCAACCA TCCCCAGGCG
CGCATTCGCC AGGTGAGGGT GCTGGAGCGC AGCGAACAGT GGCACCAGGC CCATGCACGG
GCGTTGCAAC TGGCAGCGGC ACCTGCCAAT GCGCTGGAGG AGCAGGCGCT GCAACGCATG
CTGCCACGCC TGGCGCGCAA GCTCGGCGGC CCGCCACAGC GGCGCCAGCG CACCACGCCG
CTGGAACTGA TAGAGCTCGA ACTGCCCCGC GGGGACGCTG CGCTGGGCGT TGAAGAAGCC
GTGCGTCAGC ACCTGATGCA AGAGGGGGGG CAGGCGCATT ACGTGGAGAA CACGCTGTTC
AACAGCCTGT TTGGCCTGTT GTGCTGGGAG GCCATCTTCG CCCCGGTGCC CGGCGCATTT
TTCAACCCGT TCCAGGCCGC GCCACAGGAC CTGCACGACA GCGACTTCCA GCAGCGGCGC
AGTGCGCTGT TCGAACGCTG CCTCGGGCGG CTCGACGAGG GTAGCCATCG CCAGGCGATT
CTCGACTGCT ACGTGGCCAA ACAGGGATTG CAGTCGCCGT TCGTGTCCTG GTCCATGCTC
AGCGAGGAAC TGCTGGAGCA GGCCTTGGCG TGCCTGCCGG CCGCAGCGCT CAAGCAATGT
TTCCTGCGCC TGTTGCAGGA CATTCGCAGC AACCGTGCCG GCATGCCCGA CCTGATTCAG
TTCTGGCCCG AGCAGGGCCG TTATCGCATG GTCGAGGTCA AGGGGCCCGG TGACCGCCTG
CAGGACAACC AACTGCGCTG GCTGGCGTTC TGCAGGCAAC ACGGCCTGCC GGTCGCGGTG
TGCCACGTGC GCTGGAGCGA AACACCTTGA
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| Protein sequence | MIAHSVDDPF YYLHNFRQVV LWVEQRYQDL LDDQELAFIR AFSQLQAPAQ ALMVRMVMRK
GELFRSDRLD YAEIGDTALA LQPLLALGWV REPEQLDLEQ LFALLRKEEL ARCFARQLNR
PRAAKHELLA QLQPLALAAR SLVEWFPDSD VRILQWCLQP LCDRIRLLFF GNLYQDWSDF
VLADLGLLRY EQVPFSPDSR ALQQRDDVDL AMALHHCAER LEQGGDPLPI LATLQGLHSS
NPWLARRHAR LQFAVGQQCE RLGEWDLATA VYAQCNHPQA RIRQVRVLER SEQWHQAHAR
ALQLAAAPAN ALEEQALQRM LPRLARKLGG PPQRRQRTTP LELIELELPR GDAALGVEEA
VRQHLMQEGG QAHYVENTLF NSLFGLLCWE AIFAPVPGAF FNPFQAAPQD LHDSDFQQRR
SALFERCLGR LDEGSHRQAI LDCYVAKQGL QSPFVSWSML SEELLEQALA CLPAAALKQC
FLRLLQDIRS NRAGMPDLIQ FWPEQGRYRM VEVKGPGDRL QDNQLRWLAF CRQHGLPVAV
CHVRWSETP
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