| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2837 |
|---|
| Symbol | |
|---|
| ID | 1042738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 3238867 |
|---|
| End bp | 3240177 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637146259 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | NP_744981 |
|---|
| Protein GI | 26989556 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00238614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAA TGAAGAAGTA CCAGCGCATT ACCGTCGTGT TCCTGCTGCT GATCGGCATC
GTCAACTACC TGGACCGTAG TGCGCTGTCG ATCGCCAACA CCTCCATCCA GAAAGACATG
ATGATCAGCC CGTCGCAGAT GGGCATCCTG TTGTCGGCGT TTTCCATTGC CTATGCCTTT
GCCCAGTTGC CAATGGGCAT GATCATCGAC CGCCTGGGCA GCAAGATCGC CCTCGGCGCG
TCGTTGCTGG GCTGGTCGGT TGCCCAGGCG GCGTTTGGCA TGGTCAACAG TTTTGCCGGT
TTCATGGGGC TGCGGGTGTT GCTGGGGATT GGCGAGGCGC CGATGTTCCC ATCGGCGGCC
AAAGCATTGT CAGAGTGGTT CGACGCCAAC GAGCGCGGCA CCCCGACCGG TGTGGTCTGG
TCGTCGACCT GTCTTGGCCC CTGCCTGGCG CCGCCGTTGC TGACGCTGTT CATGGTCAAC
TTTGGCTGGC GCGGCATGTT CATCATTACC GGCGTGATCG GCGTGGTACT GGCGCTGTGC
TGGCTGACCT TCTACAAGAG CAAGGCCCGT TTTCTGGCAG AGCTTGCCGC CGAAGGCAAA
CCGCTGCCGA GTGAGCGCCA GGCCGCCGCT GCAACCGCGC CGAAGGCTTC GTACTTTGCC
GGCTGGCTTG ATCTGTTCAA GCACCGCAGT ACCTGGGGCG CGGTGTTGGG TTTCATGGGG
GTGATCTACA TGCTCTGGCT GCACCTGACC TGGCTGCCGG GCTACTTCGA GCGCGAGCAT
GGCCTGGACC TGTACAAGAC CGCCTGGGTG GTGTCGCTGG CGTATGGCTT CGGTGCGGCG
GGTACCATCG TTGCCGGGCG CTTCTGTGAC TGGCTGGTAA GGCGTGGCAT GAGCGTGCTG
GGCAGCCGCA AGTTCAGTGT CATCACTGGC CTGGTGCTGG CAGCGCTGTT CACCTTGCCA
CTGTCGTTCG TCACCGGCCT GACGGGGTGC ATCATGCTGC TTTGCCTGGC GCTGTTCAGC
ATCAATATGG CCAGTGCCAC CGCCTGGATG ATCGTCAACA CCATTGTCGA CAGCCAGCGC
GTGGCCTCGT TTGGCTCGAT CCAGAACTTC GGCGGTTACA TCGCAGGCTC GGTGGCACCG
ATCGTGACGG GCTTCAGCAT CCAGTACTCG GGCTCGTTCA CCACAGCGTT CATGATCAGC
GCGGTGGTGG CGCTGTGCTC GGCGGTGGCG TACTTCCTGC TGCTACAGGC ACCCATTGGC
AGTGCCAAGG TCGAGGCGGG CGGGATGGCT GGCGCAACTG AACAGGCGTG A
|
|---|
| Protein sequence | MNPMKKYQRI TVVFLLLIGI VNYLDRSALS IANTSIQKDM MISPSQMGIL LSAFSIAYAF
AQLPMGMIID RLGSKIALGA SLLGWSVAQA AFGMVNSFAG FMGLRVLLGI GEAPMFPSAA
KALSEWFDAN ERGTPTGVVW SSTCLGPCLA PPLLTLFMVN FGWRGMFIIT GVIGVVLALC
WLTFYKSKAR FLAELAAEGK PLPSERQAAA ATAPKASYFA GWLDLFKHRS TWGAVLGFMG
VIYMLWLHLT WLPGYFEREH GLDLYKTAWV VSLAYGFGAA GTIVAGRFCD WLVRRGMSVL
GSRKFSVITG LVLAALFTLP LSFVTGLTGC IMLLCLALFS INMASATAWM IVNTIVDSQR
VASFGSIQNF GGYIAGSVAP IVTGFSIQYS GSFTTAFMIS AVVALCSAVA YFLLLQAPIG
SAKVEAGGMA GATEQA
|
|---|
| |