Gene PP_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2827 
Symbol 
ID1042713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3225622 
End bp3226644 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content64% 
IMG OID637146249 
Productalcohol dehydrogenase, zinc-containing 
Protein accessionNP_744971 
Protein GI26989546 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA TGATCCGTTT CCACAAGTTT GGCGCTGCCG ACGTGCTCCG TTGCGAAGAG 
CAGGCCGAAC CGTCACCCGC TGCCGACGAG GTGCAGATCC GCGTCGAAGC GGTTGGCGTC
AGCTGGTATG ACGTGCTGTG GCGCCAGAAT CTGGCACCGT CCCAGGCGCG TCTGCCAGCG
GGGATCGGTC ACGAAATGGC AGGGGTGGTG ACTGCGGTTG GTGAAGGGGT CGATGATATT
GCCGTCGGTG ACCGGGTCGC CAGCTTCCCG GCCACCAGTG CCAACGACCA CCCGGTGTAC
GGCGATGTCA TCGTACTGCC CCGTACAGCC ATCACGCGCT ACCCGAATGT GCTCACCCCG
ATCGAGGCCA GCGTGCACTA CACCCCGCTG CTGATCGCCT ATTTCGCCTA CGTCGACCTG
GCACGTGCCA AGGCCGGGCA GACAGCACTG GTCACCGATG CCAGCCATTG CGCCGGGCCT
GCCTTCGTGC AGCTGGGCAG GGCCCTGGGG CTGAAAGTGT TCGCCGCCAC CAAGGAAGCG
GCGCAGCGTG ACTACCTGCT GGGCTTGGGC GCAGACAAAG TGATCGTCAC CGAAGAGCAA
GACCTGCTGC TGCAGATTGG CAAGTACACC GATGGCCGTG GTGTGGACAT GGTGCTCGAC
GGCATGGGCG GCCCGCAGAT GTCACTGTTG GGTGATGTGC TGGCGCCGCG TGGCAGCCTG
GTGCTGTACG GTCTGCAAGG CGGCAACCAG ACGCCGTTCC CGGCTTGCGC GGCATTCCAG
AAGAACATTC AGTTCTATGT GCACTGCATC GGTAATTTCA CCGGCAAGCC AGAGCTTGGC
ATCAGCCAGG ACCAGGTGGC GCTGCAGCGT GCCTTGCGCG ATATCAACCA GTTCACGGCC
GACCAGCTGC TGACACCGCA GATCATCAAG GTGTACCCGT TCGAGCAGGT GGTCGAGGCG
CATCGTTACA TGGACCAATG CCCGTGCGGC GGGCGCGTCG TGCTGGACAT GGCGCAACAC
TGA
 
Protein sequence
MSRMIRFHKF GAADVLRCEE QAEPSPAADE VQIRVEAVGV SWYDVLWRQN LAPSQARLPA 
GIGHEMAGVV TAVGEGVDDI AVGDRVASFP ATSANDHPVY GDVIVLPRTA ITRYPNVLTP
IEASVHYTPL LIAYFAYVDL ARAKAGQTAL VTDASHCAGP AFVQLGRALG LKVFAATKEA
AQRDYLLGLG ADKVIVTEEQ DLLLQIGKYT DGRGVDMVLD GMGGPQMSLL GDVLAPRGSL
VLYGLQGGNQ TPFPACAAFQ KNIQFYVHCI GNFTGKPELG ISQDQVALQR ALRDINQFTA
DQLLTPQIIK VYPFEQVVEA HRYMDQCPCG GRVVLDMAQH