Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2819 |
Symbol | oprJ |
ID | 1042702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3217208 |
End bp | 3218614 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637146241 |
Product | outer membrane protein OprJ |
Protein accession | NP_744963 |
Protein GI | 26989538 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.980235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGATCA TGGTCAATCG TGTGCTTCCT ATCGTCCTGG CCTTGACCTT GGCTGGTTGC TCCCTGACGC CGACCTATCA GCGCCCCGAA GCGCCGGTGG CGGCCGAATG GGGCGATGCA GCCGGCCATA CTGGCCACTC GGTGGAGCAG TTGGACTGGC AGGCATTCAT CGTCGACCCA GTGCTGCGTC AGCTGGTCGG TACCGCGCTG GACAACAACC GCTCCTTGCG CCAGACCCTG CTCGACATCG AGCAGGCCCG TGCGCAGTAC CGGATCCAGC GGGCCGACCG GGTGCCGGGC TTGAATGCCA GCGCCTCCGG TAATCGCCAG CATTTGCCTG CGGCGCTTTC GAGCGATGGC CGCGAGGGTG TCAGCAGCAC CTATCAGGTG GGCTTGTCGC TGCCGGAATA CGAAGTGGAC CTGTTCGGCC GCGTCAAAAG CCTGAGCGAT GCGGCCCTGG AGCAGTACCT GGCCACCGAG GAAGTCGGGC GTGCCGCACG CATCGCCCTG ATCGCCGAGG TGAGCCAGGC CTACCTGGCC TTGGACGGCG CCGAGCGGCG CCAGGCGCTG ACCCGTCAGA CCCTGGCCAG CCGCGAGGAT TCCCTGGCGT TGGTCGGCCA GCGGCGCGCC GCCGGCACGG CCACGGCGCT GGACCACCAA GAGGCGCTGG GGCTGGTCGA GCAGTCCCGT GCCGAGCTCG AAGTCACCGT GCGCCAACAG CGCCAGGCCT ACAACGCGCT GGTGCTGTTG CTGGGCAGTG CCGAGGCGGC CAAGGCGATG CCCGCTGAAC GCCCGGATGA GCCGATGGTG CTCAATGACA TTGTGCCGGG CGCGCCGTCG GCATTGATCG AGCGCCGCCC CGATATCCTC GCCGCCGAAC ACCGGCTGCG CGCGCGCAAT GCCGATATCG GCGCGGCGCG GGCAGCGTTT TTCCCGCGTA TCAGCCTGAC CGGCAGCTTT GGTACCGCCA GTGCGCAGAT GTCCGGGTTG TTCGACGGTG GCTCGCGTAG CTGGGCCTTC ATGCCGCAGC TGTCGCTGCC GTTGTTCGAC GCCGGGCGCA ACCGTGCCGG GCTCAGCCTG GCTGAGGCAC GCAAGGACTC GGCCGTGGCC GCCTATGAAG GCGCGATCCA GGTCGCCTTC CGCGAAGTGG CCGATGCGCT GGCCGCCACC GACACCCTGC GCCGCGAGCA AGCCGCGCGG CGGGCCCTGG CCGACACCAG CCGCGAGACC CTGACGCTGG CCAAGGCTCG TTACGAGGGT GGGGTGGACA ACCATTTGCG CTACCTGGAC GCCCAGCGCA ACAGCTACGT GAACGAAGCA GCCTTCATCG AAGCCAGTAC CCAGCGACAA CTGGCGTTGG TCAACCTGTT CCGCGCACTC GGCGGCGGCT GGCCGAGCAA GGGCTGA
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Protein sequence | MMIMVNRVLP IVLALTLAGC SLTPTYQRPE APVAAEWGDA AGHTGHSVEQ LDWQAFIVDP VLRQLVGTAL DNNRSLRQTL LDIEQARAQY RIQRADRVPG LNASASGNRQ HLPAALSSDG REGVSSTYQV GLSLPEYEVD LFGRVKSLSD AALEQYLATE EVGRAARIAL IAEVSQAYLA LDGAERRQAL TRQTLASRED SLALVGQRRA AGTATALDHQ EALGLVEQSR AELEVTVRQQ RQAYNALVLL LGSAEAAKAM PAERPDEPMV LNDIVPGAPS ALIERRPDIL AAEHRLRARN ADIGAARAAF FPRISLTGSF GTASAQMSGL FDGGSRSWAF MPQLSLPLFD AGRNRAGLSL AEARKDSAVA AYEGAIQVAF REVADALAAT DTLRREQAAR RALADTSRET LTLAKARYEG GVDNHLRYLD AQRNSYVNEA AFIEASTQRQ LALVNLFRAL GGGWPSKG
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