| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2817 |
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| Symbol | mexC |
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| ID | 1042696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3212931 |
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| End bp | 3214067 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637146239 |
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| Product | multidrug efflux RND membrane fusion protein MexC |
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| Protein accession | NP_744961 |
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| Protein GI | 26989536 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.182401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATGGGCA AGACAGGTTC GATAAGGGTG GGCGCATTGG CCATGGCGAT CGCCTTGGCC
GGGTGTGAGC CCGCAGCAGA GCAGGACGGT GCAGCCAATG CGAGCTACCC GGTGGAAATC
GTGACATTGG CGCCCGAGCA GGTCGCCTTG GCGGCTGAAC TGCCGGGCCG GGTCGAGCCG
ATGCGCGTCG CCGAGGTGCG GGCGCGGGTG CCGGGTATCG TGTTGCACAA GCGCTTCGAG
GAAGGGGCTG ACGTCAAGGC GGGGGATGTG CTGTTCCAGA TCGACCCGGC GCCGTTCAAG
GCCGCACTGG CCCGTGCCGA GGCTGACCTG GCCCGAGCCC AGGCCGTGCA GCAGGAGGCC
CAGGCGCGGG TGAAGCGTTA TGAGCCACTG GTCAAGATCG AGGCGGTCAG CCAGCAGGAC
TTCGACAGCG CCACCGCCGA GCTGCGCAGT GCCGGTGCGG CGGTGCGCTC TGCCCAGGCC
GACGTGCAGG CCGCACGCCT GAACCTGGGC TACGCCACCG TCACCGCGCC GATCTCCGGG
CGCATTGGCC GTGCGTTGGC CACCGAAGGC GCGTTGGTGG GGCAGGGGGA GGCGACGCTG
ATGGCGCGTA TCCAGCAACT CGACCCGATC TACATCGACT TCACCCAGTC TGCCGCTGAC
GCACTGCGCC TGCGACAAGC GTTGAAGGAC GGCGCACTTT CGGCCGACAG CCAGCGCCTG
ACCGCGCAAG TGGAAGGCAC CGACTTCCAG CGCTCGGGCG AGCTGATGTT CACCGATGTG
AGTGTGGACC GCGGTACCGG CCAGGTCATC CTGCGGGGGC GCTTCGACAA CGCGGACGGC
ACGCTGCTGC CGGGCATGTA TGTGCGCGTG CGCACGCCTC AAGGCACCGA CAACCACGCC
ATCCTGGTCC CACAGCGTGC GGTTCAGCGA GGCAGCGACG GCCAGGCGCG GGTCTTGGTC
GCCACCAATG GCATCGCCGA GGCACGCGCG GTGCGCACCG GCGTGATGCA AGGCTCGCGC
TGGCAGATTA CCGAGGGGCT GGAGCCGGGC GATCAGGTGA TCGTCGGCAG CCCCGCAGGG
TTGGCCCCCG GTATGCCCGT TGCGCCTGCG CAGAAACAAA CGGCTGCCGC CCAGTGA
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| Protein sequence | MMGKTGSIRV GALAMAIALA GCEPAAEQDG AANASYPVEI VTLAPEQVAL AAELPGRVEP
MRVAEVRARV PGIVLHKRFE EGADVKAGDV LFQIDPAPFK AALARAEADL ARAQAVQQEA
QARVKRYEPL VKIEAVSQQD FDSATAELRS AGAAVRSAQA DVQAARLNLG YATVTAPISG
RIGRALATEG ALVGQGEATL MARIQQLDPI YIDFTQSAAD ALRLRQALKD GALSADSQRL
TAQVEGTDFQ RSGELMFTDV SVDRGTGQVI LRGRFDNADG TLLPGMYVRV RTPQGTDNHA
ILVPQRAVQR GSDGQARVLV ATNGIAEARA VRTGVMQGSR WQITEGLEPG DQVIVGSPAG
LAPGMPVAPA QKQTAAAQ
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