| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2801 |
|---|
| Symbol | |
|---|
| ID | 1042676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3192033 |
|---|
| End bp | 3193457 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637146223 |
|---|
| Product | gamma-aminobutyraldehyde dehydrogenase |
|---|
| Protein accession | NP_744945 |
|---|
| Protein GI | 26989520 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03374] 1-pyrroline dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAA AACTGCTGAT CAATGGTGCC CTCGTAGCCG GCGAAGGCGA CCACGTGGAC
GTCTACAACC CCTCCCTGGG CCGCGTCCTG GTACAGACCC ACGAGGCCAG TCATGCACAG
GTCCATGCCG CAGTGCAAAG CGCGGATGCG GCCTTCGAAG CCTGGTCGCA AACACCGCCC
AAGGACCGTG CGGCACTGCT GCTCACCCTC GCCGACCGCA TCGACGCCCA GGCCGCGGTG
TTCGCCCGCC TGGAGGCGGA CAACTGCGGC AAGCCGTTCA CGGCCGTGCT GCAGGATGAA
CTGCCCGCCG TGTCGGACGT GTTCCGCTTC TTCGCCGGCG CCGTTCGCTG CCTGCAAGGC
TCGGCGGCGG GCGAGTACAT CCCGGGGCAC ACCTCGATGA TCCGCCGCGA CGCGGTCGGT
GTCGTCGCCT CCATCGCGCC GTGGAACTAC CCGTTGCTGA TGGCGGCGTG GAAGCTCGGC
CCGGCCTTGG CCGGCGGCAA CACCGTGGTC CTGAAGCCCT CCGAGCACAC CCCGATGAGC
ACCTTGAAGC TGGGGGAACT GCTCGCCGAT ATCTTCCCCG CCGGGGTGGT CAATATCGTT
CATGGGCGCG GCGCCACGGT GGGTGAGCCG CTGACCAGTC ATGCTCTGGT GCGCATGGTG
TCGCTGACCG GTTCCGTACG TACCGGAAGC CGCATCATCG AAGGCACGGC CGACAGCGTT
AAGCGCATGC ATATGGAGCT GGGGGGAAAA GCCCCCGTGC TGATCTTCGA CGATGCCGAC
ATCGACGCCG CCGTCGAGGG CATTCGCGCC TTCGGCTTTT ACAACGCCGG CCAGGACTGT
ACGGCCGCGT GTCGCCTCTA TGTGCAGAAG GCGGTCTACC CGGAGTTCGT TCGCAAGCTT
GGCGAAGCCG TGTCCAGCAT CAAATGTGGG TTGCAGGATG ACCCGGCAAC CGAAATGGGC
CCGCTGATCA CCCAAGAGCA CCTGCAGCGT GTCGAGGGCT TCGTCAACCG GGCCAGGGAG
CAGCCCCATA TAGAGGTCGT CACGGGCGGC AAGCGCGCCG CAGGTGCCGG GTTCTTCTTC
GAGCCCACGG TCCTGGCCGG CACCCGGCAG GAAGACGAGG TGGTGTGCCG TGAAATTTTC
GGCCCGGTGG TAACGGTCTC GCCCTTCGAG GATGAGGCCC AGGTACTGGC CTGGGCCAAT
GAATCGGACT ACGGCCTGGC CTCTTCGGTG TGGACCGCCG ACGTGGGGCG GGCACATCGC
CTGGCCGCCC GCCTGCAGTA CGGCTGCACC TGGGTCAACA CCCATTTCAT GCTGGTGAGC
GAAATGCCCC ATGGCGGCGT GAAGCTGTCG GGGTACGGCA AGGACCTGTC CATGTACGGC
CTGGAAGACT ACACCCTGGT CCGCCACGTG ATGTTCAAGC ACTGA
|
|---|
| Protein sequence | MQTKLLINGA LVAGEGDHVD VYNPSLGRVL VQTHEASHAQ VHAAVQSADA AFEAWSQTPP
KDRAALLLTL ADRIDAQAAV FARLEADNCG KPFTAVLQDE LPAVSDVFRF FAGAVRCLQG
SAAGEYIPGH TSMIRRDAVG VVASIAPWNY PLLMAAWKLG PALAGGNTVV LKPSEHTPMS
TLKLGELLAD IFPAGVVNIV HGRGATVGEP LTSHALVRMV SLTGSVRTGS RIIEGTADSV
KRMHMELGGK APVLIFDDAD IDAAVEGIRA FGFYNAGQDC TAACRLYVQK AVYPEFVRKL
GEAVSSIKCG LQDDPATEMG PLITQEHLQR VEGFVNRARE QPHIEVVTGG KRAAGAGFFF
EPTVLAGTRQ EDEVVCREIF GPVVTVSPFE DEAQVLAWAN ESDYGLASSV WTADVGRAHR
LAARLQYGCT WVNTHFMLVS EMPHGGVKLS GYGKDLSMYG LEDYTLVRHV MFKH
|
|---|
| |