Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2797 |
Symbol | actP |
ID | 1042648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3186382 |
End bp | 3188040 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146219 |
Product | acetate permease |
Protein accession | NP_744941 |
Protein GI | 26989516 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.374436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TCGTACCTCT GGCCCTGCTG CTGCACTCAG GCCTGCTGCT GGCTTCGCCT TCGCTCGACG CTGGTCAGCG TCAGCCGCTC AACCTGCATG CCATCGGCAT GTTCATGGTG TTCGTGCTGT TCACCTTGTG CATCACCTGG TGGGCGGCGC GTCGCACACG CTCGACGACA GACTTCTACA GCGCCGGTGG CGGCATCCAG GGCTGGCAGA ACGGCCTGGC GCTGGCCGGG GACTACATGT CCGCCTCGAC GCTGTTGGGG ATCACCGCAC TCATCTACAC CTCCGGCATG GATGGCTACA TCTACCTCAT CGCTTTCTTC GCGGGCTGGC CGGTGTTGCT GCTGTTGATG ACCGAGCGGC TGCGCAACCT GGGCCGCTTC ACCTTTGCCG ATATCACCTC GTATCGCCTC GACCAAGGCA AGGTGCGCAC CATGGCCGCC ATCGGCTCGC TGACCGTGGT GTGTTTCTAC CTGGTGGCGC AGATGGTCGG GGCCGGGCAG TTGATCAGGT TGCTGTTCGG CCTGGACTAC CACATCGCGG TGGTCATCGT CGGTGCGCTG ATGATGCTGT ATGTGACCTT CGGCGGCATG GTGGCGACTA CCTGGGTGCA GATCATCAAG GCGTTCCTGC TGCTGGTCGG CGGCTCGCTG GTGCTGTTCC TGGCGATGCG CGAGTTCGAC TTCAGCTATG ACGCGCTGGT GAGCAAGGCC ATGGACACCC ATGCCCTGGG CGAACGCCTG CTGGCGCCCG GCAGCCTGCT GGCCGACCCG TTGACCGCGC TGTCGCTGAG CCTGGGGCTG GTGTTCGGCA CCGCCGGGCT GCCGCATATC CTGATGCGCT TCTTCACCGT CAGCGATGCC CGGGAGGCGC GCAAGTCGGT GCTCTATGCC ACCGGGTTCA TCGGCTACTT CTTCAATGTC ATTTTCCTGC TGGGCCTGGC GTCGATCGTG ATCGTCAGTC AGCAGCCGAA GTTCTTCGAG GGCGGTGAGG TGGGTGGCAA GCTGCTGGGC GGGGGCAATA TGGTGGTCAT GCACCTGGCC CAGGCAGTCG GCGGCAACCT GCTGCTGGGT TTCTTGTCTG CAGTGACCTT CGCCACCATC CTGGCTGTGG TTTCAGGCCT GGCTCTGGCC GGGGCGTCCG CCATCGCCCA TGACCTGTAT GCGCGGGTGA TCATGAAGGG CGCGGCCAGC GAGGCGCAGG AGCTGCGGGT GACCAAGTTG GCTACCCTGA GCCTTGGGTT GGTGGCCATA GCCTTGGGCA TCCTGTTCGA AAATATCAAC GTGGCTTTCA TGGTTGCGCT GGCCTTTGGT ATTGCCGCTT CGGCCAACTT CCCGGTGCTG TTCCTGTCGA TGTTCTGGTC GGGGCTGACC ACCCGCGGCG CATTGGCCGC TGGCTACGTC GGGTTGCTCA GTGCCATGGG CTTCGTGGTG TTTTCCAAGC TGGTGTGGGT GGATGTGTTG CACTTTGCCG AACCGCTGTT CCCCTATACC CAGCCTGCGC TGTTCTCCAT GCCGCTGGCG TTTTTGGTGG CGTATGCGGT TTCCCGGATG GACCGCACTG CGCGGGCCAA GGCCGAAAGG GCGGCCTTCG CCGACCAGTT CGTCCGTGGC CAGACCGGCC TTGGTGCCAG CGGTGCCGTC GATCATTGA
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Protein sequence | MKKLVPLALL LHSGLLLASP SLDAGQRQPL NLHAIGMFMV FVLFTLCITW WAARRTRSTT DFYSAGGGIQ GWQNGLALAG DYMSASTLLG ITALIYTSGM DGYIYLIAFF AGWPVLLLLM TERLRNLGRF TFADITSYRL DQGKVRTMAA IGSLTVVCFY LVAQMVGAGQ LIRLLFGLDY HIAVVIVGAL MMLYVTFGGM VATTWVQIIK AFLLLVGGSL VLFLAMREFD FSYDALVSKA MDTHALGERL LAPGSLLADP LTALSLSLGL VFGTAGLPHI LMRFFTVSDA REARKSVLYA TGFIGYFFNV IFLLGLASIV IVSQQPKFFE GGEVGGKLLG GGNMVVMHLA QAVGGNLLLG FLSAVTFATI LAVVSGLALA GASAIAHDLY ARVIMKGAAS EAQELRVTKL ATLSLGLVAI ALGILFENIN VAFMVALAFG IAASANFPVL FLSMFWSGLT TRGALAAGYV GLLSAMGFVV FSKLVWVDVL HFAEPLFPYT QPALFSMPLA FLVAYAVSRM DRTARAKAER AAFADQFVRG QTGLGASGAV DH
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