Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2796 |
Symbol | |
ID | 1042673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3186062 |
End bp | 3186385 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637146218 |
Product | hypothetical protein |
Protein accession | NP_744940 |
Protein GI | 26989515 |
COG category | [S] Function unknown |
COG ID | [COG3162] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00736684 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCC TGTTATACGC GCGTGTTCGC GCCAATGCCC GGTTCCAGCA ACTGGTGGCG CGCAGAAACC GTTTCACCCT GAGCCTGTTC GTGCTGATTC TGGCCACGTT CTATGGCTAC ATCGGGTTGG TATCGTTTTG GCCCGAACTG ATTGCCAGGC GCCTGGCCCA GGGGTCGAAC ATGACCGTGG GCGTGGCTGC CGGCGCCTTC CTGTTCGTGT TCTTCTGTGC GTTGTCGGCG TTCTACGTGT ACCGGGCCAA TGGCGAGTTC GATAGCCTGA CCCAGGCGCT GCTCAGCGGG CTGGAAGAGG AGCAGGGCGC ATGA
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Protein sequence | MSSLLYARVR ANARFQQLVA RRNRFTLSLF VLILATFYGY IGLVSFWPEL IARRLAQGSN MTVGVAAGAF LFVFFCALSA FYVYRANGEF DSLTQALLSG LEEEQGA
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