Gene PP_2769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2769 
Symbol 
ID1042160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3152737 
End bp3153726 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content64% 
IMG OID637146191 
Productbranched-chain amino acid ABC transporter, permease protein, putative 
Protein accessionNP_744913 
Protein GI26989488 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.387381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTATC GAGAAGCGGG TCAGTTCAGC GTGCGTTACG CCGACGACCG TCGATTCTTC 
CGCCTGCGCC AGGATCGGCT GGGCTTGGCG GCCTTGGTCC TGTTTGCCTT CATCGGTGTG
CCACTGCTGG GCAACGATTA CTGGTTCAGT GCCATCCTGA TTCCATTTCT ACTGTTGTCG
CTGGCCGGCC TCGGGCTGAA CCTGCTGACC GGTTATGCCG GGCAACTGTC GCTGGGTTCG
GCGGCGTTTA TGGCAGTAGG TGCCTTCGCG GCCTATAATT TCGAGCTGCG CGTGGCGTGG
CTGCCGCTGC TGGCCAGCCT GCTGCTCGGC GGCCTGGTGG CGGCGCTGGT GGCCGTGGTG
TTCGGCCTGC CAAGCCTGCG CATCAAGGGC TTCTATCTGC TGGTGTCGAC ACTGGCGGCG
CAGTTCTTCG TGCCATGGGC GCTGACCCGC TTCAGTTGGT TCAGCAACGA CAGTGCCTCG
GGGGTGATCA GCGCGCTGTT CTGGCTGGGC GCCAACCTGG TGCGCAGCGA ACTGGGGCGC
AACTGGATGG CGGTGCGCGA CATGGACACC GCCGCCGCAG TGATCGGCAT CCCCCTGTTG
AAGACCAAAC TGCTGGCTTT TGCCATCAGC GGCTTCTACC TCGGCGTGGC CGGTTCGCTC
TGGGCCTTCA CCTACCTGGG CACGGTGGAG CCACACGGCT TCGACCTGAA CCGCTCGTTC
CAGATCCTGT TCATCATCAT TATCGGCGGC CTGGGCAGCA TCCTCGGGAA CTTCCTCGGC
GCCGCCTTCA TCGTGCTGTT CCCGGTGCTG CTGTCGAACC TGGCCGGGTT GCTGCCGACT
GGGCTGATCG ATGCCGGGCA GATAGAGAAC CTGCAGAAGA TTGCCTTCGG CACGCTGATC
ATCATCTTCC TGATCAAGGA ACCGGAGGGC CTGGCGCGCC TCTGGCAACG CTTTCGCGAG
CGCGCTCGGC GTTGGCCGTT GCGCTACTGA
 
Protein sequence
MLYREAGQFS VRYADDRRFF RLRQDRLGLA ALVLFAFIGV PLLGNDYWFS AILIPFLLLS 
LAGLGLNLLT GYAGQLSLGS AAFMAVGAFA AYNFELRVAW LPLLASLLLG GLVAALVAVV
FGLPSLRIKG FYLLVSTLAA QFFVPWALTR FSWFSNDSAS GVISALFWLG ANLVRSELGR
NWMAVRDMDT AAAVIGIPLL KTKLLAFAIS GFYLGVAGSL WAFTYLGTVE PHGFDLNRSF
QILFIIIIGG LGSILGNFLG AAFIVLFPVL LSNLAGLLPT GLIDAGQIEN LQKIAFGTLI
IIFLIKEPEG LARLWQRFRE RARRWPLRY