| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2741 |
|---|
| Symbol | |
|---|
| ID | 1041942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3123612 |
|---|
| End bp | 3125249 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637146163 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | NP_744885 |
|---|
| Protein GI | 26989460 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATGA AGCGCAGGTT GGGACGGGCT GCTTGGCTGA TGCTACTGAT CCACCTGCTG
TTCTCGCCCC TGCTCCACGC AGGCACCCCT CAGGCCGGGC CGGAGATAGA GGGTGTGATT
GCCGAACCCG CCCCGCTGAC CGTCATCAAC CGCACGGTGC TGGTCTTTCG TGCGACGCTG
CTGGGCGAAA CACCCAAGGT GCGCGCCCAG CGCGCCAAGA AGGTCATCGA GGAAACGCTC
CAGGAAACGA ACGACCTGGA GGTTCGCGTC GACCCTATCC TGCGAAGCTA CCTGGTGCTG
CTGGGCGGGC GCCGTGCATT CATCGTGACG CCACTGGATG CTGCGGCCGA CAACATTACA
ACAGGCGAAG CCGCCGAGCA GGCCGCCGAG AACCTGCGCC TTGTCGTCGA GGAAACCCGC
CAGGCGCGTA GCCTGCGGTT CTTGCTCACC GCGATAGGCT ACAGCGCTGC GGCAACCTTG
GTCTTTTTCA TGCTGGTAAA GGCCGCAGGC TACTGTCGAC GCAAGCTCCT GGGGCTGCTG
CCCAAACTGA TGGGCAAACA CTCCGAGCGC CTCAAGGTCG GCCACACGCA ACTGTTCGAC
CTGCAGAACC TGTACTACCT GATCGACCGT TCACTCTGGC TGCTGTACTG GTTGGTCGTG
TTGTTGTTCT GCTACCAGTG GCTGGGCTTC GTGCTGTCTC AGTTCCCCTA CACAAGGTCT
TGGGGGGAAA GCCTCAATAT CCACCTGATG GCGCTGCTCA ACTACCTGAT CAGCGGTATT
TTGCGCGCCA TGCCCGGCCT GGCCGTTGCA CTGTCGATCT TCTTCATCGC CCGTGGCATC
AGCGCCTTCT CCAAGCGTGT GCTAAGGCGC ATGGCACGCC CGGGCACGTT GAAATGGCTG
ACCGCTGAAA CCTTGCAACC AACCATGCGC CTGACGTCGC TGGCGATCTG GCTCTTCGCC
CTGGTGATGG CCTACCCCTA TCTACCCGGC TCGGGTACCG ATGCCTTCAA GGGGTTGTCA
GTGTTGCTCG GTCTGATGAT TTCACTGGGG GCGACCAGTG TCATCGGCCA AGGGGCAGCC
GGATTGATCC TTACCTACAC ACGCACGCTG CGCGCCGGTG AATTTGTACG TGTGGGTGAT
CACGAGGGCA CGGTGACCGA GGTGGGCATG TTCACCACGA CCATTCGCAC CGGGCTTGGC
GAAGTGCTGA CACTCCCCAA CTCGATGATT ACCGGCTCGG TGACCAAGAA CTACTCACGT
ATCGTGCAAG GGCCAGGCTA TGTGGTCGAT ACCGTGGTGA CCATCGGCTA CGACACCCCG
TGGCGTCAGG TCGAGGCGAT GTTGCTGGAA GCGGCTCGGC GCACCGACGG CGTGCTGCAA
ACGCCCACGC CCCAGGTATT CCAGACGGCG CTGTCGGACT TCTACCCCGA GTACCGATTA
GTGGCCCAGG CCATTCCGTC AGAGCCCAGG CCACGCGCGC AGCTTTTGAG CCTGTTGCAC
GCCAATATCC AGGACGTGTT CAACGAGTAT GGGGTGCAAA TCATGTCGCC TCACTACCTG
GGCGACCCCG AGCAGCCCAA ATGGGTGCCC AAGGAGCAGT GGCACGCGGC CCCGTCCAAA
CCTGAAAACA CCGGGTGA
|
|---|
| Protein sequence | MGMKRRLGRA AWLMLLIHLL FSPLLHAGTP QAGPEIEGVI AEPAPLTVIN RTVLVFRATL
LGETPKVRAQ RAKKVIEETL QETNDLEVRV DPILRSYLVL LGGRRAFIVT PLDAAADNIT
TGEAAEQAAE NLRLVVEETR QARSLRFLLT AIGYSAAATL VFFMLVKAAG YCRRKLLGLL
PKLMGKHSER LKVGHTQLFD LQNLYYLIDR SLWLLYWLVV LLFCYQWLGF VLSQFPYTRS
WGESLNIHLM ALLNYLISGI LRAMPGLAVA LSIFFIARGI SAFSKRVLRR MARPGTLKWL
TAETLQPTMR LTSLAIWLFA LVMAYPYLPG SGTDAFKGLS VLLGLMISLG ATSVIGQGAA
GLILTYTRTL RAGEFVRVGD HEGTVTEVGM FTTTIRTGLG EVLTLPNSMI TGSVTKNYSR
IVQGPGYVVD TVVTIGYDTP WRQVEAMLLE AARRTDGVLQ TPTPQVFQTA LSDFYPEYRL
VAQAIPSEPR PRAQLLSLLH ANIQDVFNEY GVQIMSPHYL GDPEQPKWVP KEQWHAAPSK
PENTG
|
|---|
| |