Gene PP_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2711 
Symbol 
ID1041753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3101364 
End bp3102170 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content63% 
IMG OID637146133 
Productshort chain dehydrogenase 
Protein accessionNP_744855 
Protein GI26989430 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGG CTGAGTCCGT GGTGATCCTC ACCGGCGCCA GTGGGGGCAT AGGCCTGGAA 
TTGGCTGAAC AGCTCTGCGC TGCCGGTGCC CAGGTGTTGG CCGTCAGTCG GCATATGGGC
AAGCTGGCTG GCCTGATGAA CCGGTACCCT GATCGTCTGC GCTGGCAGGA GGCCGACCTG
CGCAGCCCGT CAGGGCGCGA ACAGGTCATC GAGCGGGCAC GCGAGATGGG GGCTGTGAAT
GTGCTGATCA ACGCTGCTGG CGTGAATCGC TTCGCTCTGC TCGACCAGCT GGATGAGTAT
GCGTTGGACG AGCTATTGGA CATCAACCTG AAGGCTCCCC TGCAACTGAC CCGCGCCTGC
CTGCCGTTGC TGCGCGCTCA GCCCAAGGCG TTGGTGGTCA ATGTCGGGTC GACCTATGGC
TCGATCGGCT ACCCCGGCTA CGCCACCTAC TGCGCCAGCA AGTTTGCGCT GCGTGGTTTT
TCGCAAGCGC TGCGCCGCGA GTTGGCCGAC ACCACGGTGA ACGTGCTGTA TGCCGCCCCC
CGGGCGACCC GCACAACGAT GAACAGCAGC GCTGCGACTG CGCTCAATCA AGCGCTGAAA
GTTGGTATGG ACGACCCGGC GGACGTCGCC CGTGCTGTGC TCCAGGCGGT GCAATCCGAG
CGCACCGAGC TTTACCTGGG GTGGCCGGAA AAGCTCTTCG TGCGTATCAA CGGCATGTTG
CCGGGCATGG TCGATCGCGC TCTACGCAAG CAACTGCCAG TCATTCGCCG CTATATCGGC
AGCCACTCCA AGGAGTCGAA CAAATGA
 
Protein sequence
MRLAESVVIL TGASGGIGLE LAEQLCAAGA QVLAVSRHMG KLAGLMNRYP DRLRWQEADL 
RSPSGREQVI ERAREMGAVN VLINAAGVNR FALLDQLDEY ALDELLDINL KAPLQLTRAC
LPLLRAQPKA LVVNVGSTYG SIGYPGYATY CASKFALRGF SQALRRELAD TTVNVLYAAP
RATRTTMNSS AATALNQALK VGMDDPADVA RAVLQAVQSE RTELYLGWPE KLFVRINGML
PGMVDRALRK QLPVIRRYIG SHSKESNK