Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2701 |
Symbol | |
ID | 1046218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3092037 |
End bp | 3092975 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637146123 |
Product | LysR family transcriptional regulator |
Protein accession | NP_744845 |
Protein GI | 26989420 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACTTC ACCAACTCAG GGCGCTGGTC GCCATTCATA ACGCAGGTAG CATCCTCGAA GCCTCCAAGC TCATGCACAT TACTCAGCCC GCGCTGAGCC GCTCGATCAA GGAGCTGGAG CGGGAGGTAG GGTTTACCCT GTTGCAGCGG TCGCACAAAG GCATGGCCCT TACCGAGGAA GGCAAGCGTG TCATCCGCCA TGCCAACCTC GTGGTAGAGA GCATACGCCG CCTGCAGATC GAAGCGGCGA GCATTCAGGA TGCGGCGCTG GGCGCCGTGT CGATCGGGGT GACGTCGTTG ACGGCGATGC TCGATGGCGT CGATGAAAGT ATCCTGGCCT TTCGGCGCAA GTACCCGCGG GTGAAGATCA CCATCACCGA CCTGCGTCCC AGCCAGATCC TGCAGCGCTT GCGCGATGGC AGCCTGGACT TTGCCATTAC TTCGCAGCAA CCGCTGAGTC GGCTGAGCCT GGACTGGGAG GCGCTGGGCA GTATCAAGGG CAGGGTGATT TGCCACGCCT CGAATCGGCA GAAGTTCAGC CAGTCACTGC GCACCTTGCA ATACGCCCCC TGGATCAGCC TGGACGAGTT GTCCGACCAG GCTTCGCAGT TTCACCAACT GTTCGAGGCC AACGGCCTTC GGGTGCCACA GAACACCGTT GAATGCACTT CAGTGATGAT GGCGCTGAAG CTGTTGAAGA ACACGGAATC GTTGATGACC ATCAGCGAAC TGGCGGTGGA CCAAGGGTTT ACCTACGGTA TCGATTGCGA GTTCGTCGCC ATGGCGGTGC AGGAGTTGAT TCCGGATTAC CCCATCAATC TGGTCTGCAT CGACCGCCAC AGCCTCACGG CGCCTGCCCA GGAGCTGTTC CACAGCTTGC GCGGGCAGGT GCTCAAGCAG ACCCGCCCCG TGGGGTCAGA AGTGGTAGTA CATGCCTAG
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Protein sequence | MKLHQLRALV AIHNAGSILE ASKLMHITQP ALSRSIKELE REVGFTLLQR SHKGMALTEE GKRVIRHANL VVESIRRLQI EAASIQDAAL GAVSIGVTSL TAMLDGVDES ILAFRRKYPR VKITITDLRP SQILQRLRDG SLDFAITSQQ PLSRLSLDWE ALGSIKGRVI CHASNRQKFS QSLRTLQYAP WISLDELSDQ ASQFHQLFEA NGLRVPQNTV ECTSVMMALK LLKNTESLMT ISELAVDQGF TYGIDCEFVA MAVQELIPDY PINLVCIDRH SLTAPAQELF HSLRGQVLKQ TRPVGSEVVV HA
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