Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2688 |
Symbol | |
ID | 1046156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3077853 |
End bp | 3079262 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146110 |
Product | hypothetical protein |
Protein accession | NP_744832 |
Protein GI | 26989407 |
COG category | [S] Function unknown |
COG ID | [COG2308] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.415164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.32013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCGGG CTTTTTTCAA TGAAATGTAC GAAGCGGACG GCAACTGCCG CCCGCATTAT CAGGAGTTCG CCCGCTGGCT GGCCAACACC CCGCTGGAGT TGCTGGAACA GCGCCGGCGC GAGGCCGACC TGCTGTTTCA CCGCGCAGGC ATCACCTTCA CCTTGTATGG CGACAAGCAG GATACCGAGC GCCTGATCCC CTTCGATATC ATCCCGCGCA GCATCCGCGC CAGCGAATGG CGCACGGTCG AGCGTGGCTG CATTCAACGG GTACAGGCGC TGAACCTGTT CCTGGAGGAC ATCTACCACG ACCAACGCAT TCTCAAGGCC GGCATCATCC CGCCAGAGCA AGTGCTGGCC AACGAGGGCT ACCAGATCGC CATGCAGGGC CTGGACCTTC ACCGTGGGCT GTATGCGCAT ATTGCCGGTG TCGATCTGGT ACGTGACGGC GATGGCAGCT ACTTCGTGCT GGAAGACAAC CTGCGCACCC CCAGCGGCGT CAGCTACATG CTCGAAGACC GCAAGATGAT GATGCGCCTG TTCCCCGAAC TGTTTGCCGC CCAGCGCATC GCGCCCATCG ATCACTACCC CAACCTGCTG CTGGACACGC TCAAGAGCGC CAGCCCACTG GACAACCCCA CCGCGGTGCT GCTCACGCCC GGCCGTTTCA ACAGCGCCTA TTTCGAGCAT GCCTTCCTGG CCCGGGAAAT GGGCATCGAG CTGGTCGAAG GCGCCGACCT GTTCGTGCGT GATGAGCATG TCTACATGCG CACCACTGCC GGCCCCCAAC AGGTGGACGT GATCTATCGT CGCCTGGACG ACGACTACCT CGACCCGCTG TCCTTCAACC CTGACTCGAT GCTGGGCGTA CCGGGGCTGA TCTCGGTTTA CCGCGCCGGC AATGTGGTAC TGGCCAACGC CGTCGGCACT GGCGTGGCCG ATGACAAATC CATCTACCCC TTCGTCGACG ACATGATCCG CTTTTACCTG AGCGAAGAAC CAATCCTGAA CAACGTGCCG ACCTGGCAGT GCCGCAAGCC GGCGGATCTG TCCCATGTAC TGGCCCACCT GCCCGAACTG GTGGTCAAGG AAACCCAGGG CTCCGGCGGC TATGGCATGT TGGTCGGGCC CGCCTCGACC AAAGCCCAGA TCGAGGACTT CCGCGCGCGC ATCAAAGCCC GCCCGCACGC CTATATCGCT CAACCGACGC TGTGCCTGTC AACCTGCCCG ACCTTCGTCG ACAGCGGCAT CGCACCGCGT CACATCGACC TGCGCCCGTT CGTGTTGTCG GGCAGTGAAA CCCGCCTGGT GCCCGGTGGC CTGACGCGCG TGGCGCTCAA GGAAGGCTCG CTGGTGGTCA ACTCGTCGCA AGGCGGCGGT ACCAAGGACA CCTGGGTGGT GGAGGACTGA
|
Protein sequence | MSRAFFNEMY EADGNCRPHY QEFARWLANT PLELLEQRRR EADLLFHRAG ITFTLYGDKQ DTERLIPFDI IPRSIRASEW RTVERGCIQR VQALNLFLED IYHDQRILKA GIIPPEQVLA NEGYQIAMQG LDLHRGLYAH IAGVDLVRDG DGSYFVLEDN LRTPSGVSYM LEDRKMMMRL FPELFAAQRI APIDHYPNLL LDTLKSASPL DNPTAVLLTP GRFNSAYFEH AFLAREMGIE LVEGADLFVR DEHVYMRTTA GPQQVDVIYR RLDDDYLDPL SFNPDSMLGV PGLISVYRAG NVVLANAVGT GVADDKSIYP FVDDMIRFYL SEEPILNNVP TWQCRKPADL SHVLAHLPEL VVKETQGSGG YGMLVGPAST KAQIEDFRAR IKARPHAYIA QPTLCLSTCP TFVDSGIAPR HIDLRPFVLS GSETRLVPGG LTRVALKEGS LVVNSSQGGG TKDTWVVED
|
| |