Gene PP_2688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2688 
Symbol 
ID1046156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3077853 
End bp3079262 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content63% 
IMG OID637146110 
Producthypothetical protein 
Protein accessionNP_744832 
Protein GI26989407 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.415164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.32013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGGG CTTTTTTCAA TGAAATGTAC GAAGCGGACG GCAACTGCCG CCCGCATTAT 
CAGGAGTTCG CCCGCTGGCT GGCCAACACC CCGCTGGAGT TGCTGGAACA GCGCCGGCGC
GAGGCCGACC TGCTGTTTCA CCGCGCAGGC ATCACCTTCA CCTTGTATGG CGACAAGCAG
GATACCGAGC GCCTGATCCC CTTCGATATC ATCCCGCGCA GCATCCGCGC CAGCGAATGG
CGCACGGTCG AGCGTGGCTG CATTCAACGG GTACAGGCGC TGAACCTGTT CCTGGAGGAC
ATCTACCACG ACCAACGCAT TCTCAAGGCC GGCATCATCC CGCCAGAGCA AGTGCTGGCC
AACGAGGGCT ACCAGATCGC CATGCAGGGC CTGGACCTTC ACCGTGGGCT GTATGCGCAT
ATTGCCGGTG TCGATCTGGT ACGTGACGGC GATGGCAGCT ACTTCGTGCT GGAAGACAAC
CTGCGCACCC CCAGCGGCGT CAGCTACATG CTCGAAGACC GCAAGATGAT GATGCGCCTG
TTCCCCGAAC TGTTTGCCGC CCAGCGCATC GCGCCCATCG ATCACTACCC CAACCTGCTG
CTGGACACGC TCAAGAGCGC CAGCCCACTG GACAACCCCA CCGCGGTGCT GCTCACGCCC
GGCCGTTTCA ACAGCGCCTA TTTCGAGCAT GCCTTCCTGG CCCGGGAAAT GGGCATCGAG
CTGGTCGAAG GCGCCGACCT GTTCGTGCGT GATGAGCATG TCTACATGCG CACCACTGCC
GGCCCCCAAC AGGTGGACGT GATCTATCGT CGCCTGGACG ACGACTACCT CGACCCGCTG
TCCTTCAACC CTGACTCGAT GCTGGGCGTA CCGGGGCTGA TCTCGGTTTA CCGCGCCGGC
AATGTGGTAC TGGCCAACGC CGTCGGCACT GGCGTGGCCG ATGACAAATC CATCTACCCC
TTCGTCGACG ACATGATCCG CTTTTACCTG AGCGAAGAAC CAATCCTGAA CAACGTGCCG
ACCTGGCAGT GCCGCAAGCC GGCGGATCTG TCCCATGTAC TGGCCCACCT GCCCGAACTG
GTGGTCAAGG AAACCCAGGG CTCCGGCGGC TATGGCATGT TGGTCGGGCC CGCCTCGACC
AAAGCCCAGA TCGAGGACTT CCGCGCGCGC ATCAAAGCCC GCCCGCACGC CTATATCGCT
CAACCGACGC TGTGCCTGTC AACCTGCCCG ACCTTCGTCG ACAGCGGCAT CGCACCGCGT
CACATCGACC TGCGCCCGTT CGTGTTGTCG GGCAGTGAAA CCCGCCTGGT GCCCGGTGGC
CTGACGCGCG TGGCGCTCAA GGAAGGCTCG CTGGTGGTCA ACTCGTCGCA AGGCGGCGGT
ACCAAGGACA CCTGGGTGGT GGAGGACTGA
 
Protein sequence
MSRAFFNEMY EADGNCRPHY QEFARWLANT PLELLEQRRR EADLLFHRAG ITFTLYGDKQ 
DTERLIPFDI IPRSIRASEW RTVERGCIQR VQALNLFLED IYHDQRILKA GIIPPEQVLA
NEGYQIAMQG LDLHRGLYAH IAGVDLVRDG DGSYFVLEDN LRTPSGVSYM LEDRKMMMRL
FPELFAAQRI APIDHYPNLL LDTLKSASPL DNPTAVLLTP GRFNSAYFEH AFLAREMGIE
LVEGADLFVR DEHVYMRTTA GPQQVDVIYR RLDDDYLDPL SFNPDSMLGV PGLISVYRAG
NVVLANAVGT GVADDKSIYP FVDDMIRFYL SEEPILNNVP TWQCRKPADL SHVLAHLPEL
VVKETQGSGG YGMLVGPAST KAQIEDFRAR IKARPHAYIA QPTLCLSTCP TFVDSGIAPR
HIDLRPFVLS GSETRLVPGG LTRVALKEGS LVVNSSQGGG TKDTWVVED