| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2686 |
|---|
| Symbol | |
|---|
| ID | 1046154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3076123 |
|---|
| End bp | 3076902 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637146108 |
|---|
| Product | transglutaminase-like domain-containing protein |
|---|
| Protein accession | NP_744830 |
|---|
| Protein GI | 26989405 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.273708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGT CCATTCGCCA CGACACGACC TATAGCTACG CCAGCGACGT GTGCAACAGT
ATCCAGTTCC TGCGCCTGAC GCCGCGCAGC AGCGAACGCC AGCGTATCAA TCAATGGCAA
CTGGACCTGC CCTGCAAGGT CAAGGGCCAG ATCGACCCTT ACGGCAACAT CCTGCATGTG
CTGACACTGG ACAAACCCCA TGGCCACCTG GCGCTTACCG CACACGGCCA GGTCGAGATC
GACCCGGATT GCGAACACGA AACCGAGAGC CAGTCGCCCC TGCCGTTCCT GCGCGGCAGC
CACCTGACGC AGGCCGACGA CACCCTGACT GCTTTCGCCG CCCGGCAATG TGGCAGTCAC
CGCGACCGGG CAGCACTGAT CGGGCTGATG CAAGGCCTGG CCGAGCACAT GCCCTACAGC
CCTGGGGCCA CGTCAGTGGG CACCACGGCC ATCGAAGCCT TCAACGGTGG CGCAGGTGTG
TGTCAGGACC ACACGCACGC GTTCCTGGCC TGCGCACGCA GCCTGGGGGT ACCGGCACGC
TATGTGTCCG GCTACCTGTG CACCGAGGAC GAACAACACC TGGCCAGCCA CGCCTGGGCC
GAAGCCTGGG TCGACGATGC CTGGTACAGC TTCGACATTA CCAACCGCCT GACCCGGCCA
GAGCGTCACC TGAAGCTGGC GGTGGGCCTG GACTACCTTG ATGCCTGCCC GGTCAGGGGC
GTACGCCGCG GCGGCGGCGC CGAATCGATG CAGGCCAGCG TTCACGTGCA TCGCCAGTGA
|
|---|
| Protein sequence | MKLSIRHDTT YSYASDVCNS IQFLRLTPRS SERQRINQWQ LDLPCKVKGQ IDPYGNILHV
LTLDKPHGHL ALTAHGQVEI DPDCEHETES QSPLPFLRGS HLTQADDTLT AFAARQCGSH
RDRAALIGLM QGLAEHMPYS PGATSVGTTA IEAFNGGAGV CQDHTHAFLA CARSLGVPAR
YVSGYLCTED EQHLASHAWA EAWVDDAWYS FDITNRLTRP ERHLKLAVGL DYLDACPVRG
VRRGGGAESM QASVHVHRQ
|
|---|
| |