Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2685 |
Symbol | |
ID | 1046150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3075327 |
End bp | 3076049 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637146107 |
Product | hypothetical protein |
Protein accession | NP_744829 |
Protein GI | 26989404 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3484] Predicted proteasome-type protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.292721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTACT GTGTCGCCAT GCACCTGGAG GACGGGCTTG TCTTCATCAG CGACTCACGC ACTAATGCCG GCATCGACCA GATCTCCACG TTCACCAAGT TGTTCGTCTT CAGCGTCCCG GGCGAGCGGC TGATCGTGCT GCAGACCGCC GGCAATCTGG CGACCTCGCA GTCGGTGGTA AACCTGCTGC AGCAACACAC CCAGGGCAAC GGCCCCCACC TGCTGAACGT TGCCACGCTC TACGATGCAA CGGTGCTGGT CGCCGACACC CTGCGCGAGG TGGTCAAAAG AGACCGCAGC AAGCTCACGG CCGATATCGA CCTTAGCAGT TCATTCATTG TCGGCGGCCA GATAGCCGGC GGCCCCATGG CCATCTACAA CGTGTATGCA CAAGGCAATT TCTTCCAGGC CACACCGGAC ACCCCGTTTC TGCAGCTGGG TGAAAGCAAG TACGGCAGGC CAATACTCGA CCGCAACCTG GATTACCGCA CGCCGCTTGA TGAAGCGCTG CGCTGCGGCC TGATTTCGTT CGACTCCACC ATCCGCAGCA ACCTGTCGGT GGGCATGCCG CTGGACTTGC TGGTGTACCG CAATAACAGC CTGGAAAGCA TGACGCGCAA GCGCATTACC AGCGACGATG CCTATTATCA ACAGATTCGC AGGCAGTGGA GCGACGGTTT GAAAACCCTG CTGGCCGAAC TGCCAGCGCC GCCTTATGGC TGA
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Protein sequence | MTYCVAMHLE DGLVFISDSR TNAGIDQIST FTKLFVFSVP GERLIVLQTA GNLATSQSVV NLLQQHTQGN GPHLLNVATL YDATVLVADT LREVVKRDRS KLTADIDLSS SFIVGGQIAG GPMAIYNVYA QGNFFQATPD TPFLQLGESK YGRPILDRNL DYRTPLDEAL RCGLISFDST IRSNLSVGMP LDLLVYRNNS LESMTRKRIT SDDAYYQQIR RQWSDGLKTL LAELPAPPYG
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