Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2679 |
Symbol | |
ID | 1046129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3066959 |
End bp | 3068746 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146101 |
Product | quinoprotein ethanol dehydrogenase, putative |
Protein accession | NP_744823 |
Protein GI | 26989398 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAT CCCCACGTCG CCCCTTGTTC GCCGTGAGCC TGGTGCTCAG CGCCATGCTG CTTGCCGGCG CGGCTCACGC CGCTGTCAGC AATGAAGAAA TCCTCCAGGA CCCGAAGAAC CCGCAGCAGA TCGTGACCAA TGGCCTGGGC GTGCAGGGCC AGCGCTACAG CCCGCTGGAC CTGCTCAATG TCAATAACGT CAAGGAGCTG CGCCCGGTCT GGGCGTTCTC CTTCGGCGGG GAGAAGCAGC GCGGCCAGCA GGCCCAGCCG CTGATCAAGG ACGGGGTGAT GTACCTGACC GGCTCCTACT CGCGGGTGTT CGCCGTGGAT GCCCGCACCG GCAAGAAACT GTGGCAATAC GATGCACGTC TGCCGGATGA CATCCGCCCC TGCTGCGACG TAATCAACCG CGGCGTCGCG CTGTACGGCA ACCTGGTGTT CTTCGGCACG CTGGACGCCA AGCTGGTGGC CCTGAACAAG GACACCGGCA AGGTGGTCTG GAGCAAGAAG GTCGCCGACC ACAAAGAAGG CTACTCCATC AGCGCCGCGC CGATGATCGT CAATGGCAAG CTGATCACAG GCGTTGCCGG CGGCGAGTTC GGCGTGGTGG GCAAGATCCA GGCGTACAAC CCGGAGAACG GCGAACTGCT GTGGATGCGC CCCACCGTGG AAGGGCACAT GGGCTATGTG TACAAGGATG GCAAGGCGAT CGAGAACGGT ATTTCCGGCG GTGAGGCGGG CAAGACCTGG CCTGGCGACC TGTGGAAGAC CGGCGGCGCC GCGCCGTGGC TGGGGGGTTA CTACGACCCT GAAACCAACC TGATCCTGTT TGGTACCGGT AACCCGGCGC CGTGGAACTC GCACCTGCGC CCCGGTGACA ACCTGTACTC CTCCTCACGC CTGGCACTGA ACCCGGACGA CGGCACCATC AAGTGGCACT TCCAGAGCAC GCCGCATGAC GGCTGGGACT TCGACGGCGT CAACGAGCTG ATCTCGTTCA ACTACAAGGA CGGCGGCAAG GAGGTCAAGG CTGCCGCCAC GGCAGACCGC AACGGTTTCT TCTACGTGCT CGACCGCACC AACGGCAAGT TCATCCGCGG CTTCCCCTTC GTGGACAAGA TCACCTGGGC CACTGGCCTG GACAAGGACG GCCGGCCGAT CTACAACGAC GCCAGCCGCC CGGGCGCACC CGGCAGCGAG GCCAAGGGCA GCTCGGTGTT CGTCGCGCCG GCCTTCCTCG GCGCCAAGAA CTGGATGCCG ATGGCCTACA ACAAGGACAC AGGGCTGTTC TACGTGCCGT CCAACGAGTG GGGCATGGAC ATCTGGAACG AAGGCATCGC CTATAAGAAA GGTGCGGCGT TCCTCGGTGC CGGCTTCACC ATCAAGCCGC TCAATGAAGA CTACATCGGC GTGCTGCGCG CCATCGACCC GGTCAGCGGC AAGGAAGTGT GGCGCCACAA GAACTATGCG CCGCTGTGGG GCGGTGTGCT GACCACCAAG GGCAACCTGG TGTTCACGGG CACGCCAGAG GGCTTCCTGC AGGCATTCAA CGCCAAGACC GGCGACAAGG TCTGGGAATT CCAGACCGGC TCGGGCGTGC TCGGCTCGCC CGTCACCTGG GAAATGGACG GCGAGCAATA CGTTTCGGTA GTCTCCGGCT GGGGCGGCGC GGTGCCGCTG TGGGGCGGCG AAGTGGCCAA ACGGGTCAAG GACTTCAACC AGGGCGGCAT GCTCTGGACC TTCAAGTTGC CCAAGCAGTT GCAGCAAACG GCAAGCGTCA AGCCATAA
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Protein sequence | MTRSPRRPLF AVSLVLSAML LAGAAHAAVS NEEILQDPKN PQQIVTNGLG VQGQRYSPLD LLNVNNVKEL RPVWAFSFGG EKQRGQQAQP LIKDGVMYLT GSYSRVFAVD ARTGKKLWQY DARLPDDIRP CCDVINRGVA LYGNLVFFGT LDAKLVALNK DTGKVVWSKK VADHKEGYSI SAAPMIVNGK LITGVAGGEF GVVGKIQAYN PENGELLWMR PTVEGHMGYV YKDGKAIENG ISGGEAGKTW PGDLWKTGGA APWLGGYYDP ETNLILFGTG NPAPWNSHLR PGDNLYSSSR LALNPDDGTI KWHFQSTPHD GWDFDGVNEL ISFNYKDGGK EVKAAATADR NGFFYVLDRT NGKFIRGFPF VDKITWATGL DKDGRPIYND ASRPGAPGSE AKGSSVFVAP AFLGAKNWMP MAYNKDTGLF YVPSNEWGMD IWNEGIAYKK GAAFLGAGFT IKPLNEDYIG VLRAIDPVSG KEVWRHKNYA PLWGGVLTTK GNLVFTGTPE GFLQAFNAKT GDKVWEFQTG SGVLGSPVTW EMDGEQYVSV VSGWGGAVPL WGGEVAKRVK DFNQGGMLWT FKLPKQLQQT ASVKP
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