| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2626 |
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| Symbol | |
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| ID | 1046015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3001957 |
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| End bp | 3003420 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637146048 |
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| Product | hypothetical protein |
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| Protein accession | NP_744770 |
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| Protein GI | 26989345 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0739443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTGG TAGCGCAGGT ATCCGGGGAA GAGGTCACTC GGTTGCTCGC GCCGATTGAT
CCGGCAGTTC CGGCTGGCCT GTTCGATGTC GAGGACGAAA CCTATCAGGC CATTGATCAG
GAGATGGTCA AGCTGGGTGG GCTGCAGGAA GCCTCGATCG ACTGGGTCTA CATCGAAGAC
GCGTCCCGTC AGTACCTGAG CCAGCAATGC AAGCACTTGC GAATCGTTGC GCACCTGAGT
GCCGCATGGT TGCGTAGCGG CTGCTGGGAG CAGTGGGGAT GCACCTTGGC GTTGCTGGCC
GGCATGCTCG AGTGCTATTG GGAAGCCGCT CATCCCAAGC CGGGGCCGAA AGGCTTCCTG
GGCAAGCGCA AGCTGGTTGC CCTGGTGATC GATCGCTTGG CCGAGGCGCT CCCGCGTCTT
GATCGTTTTA CCTACACCCC GACCCACGCA GCGGCAGCGC AGGCTGCCTT GAAACGCCTG
CAACAACAGG AAACAGTACA GCTGGACACG GCAGCACTGG GCGAGCTTGA GCGCCTGCTA
GGCAAGTACT CGGAACTTGC CAACGGTGTT GGCGAGGCTG CTGTGCCCAA AGCGCCGGCT
GCAACCGAGA AGCCTGCACC GTTGGCCGAT GTCATCGCCA CACCCGTGTC ACGCATGTCG
ATGGGCAATG AGCGTGAGAC ACGCCGGGCC GTGCTGTCCA TGGCCGAGCT CATCAACCAG
CAGGACCCTT ACGACGCTAC CGGCTACCAG TTACGGCGTT TCGGTTTGTG GGCGCACATT
CAGGTTGCTC CCCAAGTCAG GCAGGGCAAC CGTACGGAAT TGATGGCGGT GCCGCTGGAT
ATCACGCGGT TCTATGAAGA GGCCATTGCC AGTAAGGCGG TTGACCCCGC CTTGCTGCAG
CGTATTGAAA AGAGCCTGAC GGCTTGCCCC TTCTGGATTC GTGGCAGCTT TCTGGCTGCG
ACCGTCGCCA CACAGCTGGC GATGTGCGAG GTGGCCGAAG CCATCCGTTG TGCCACCGCC
CGGTTTGTAC AGCGCATGCC CTCGCTGCAG CAGCTGTGCT TCAGCGACGG CATGGTATTT
GTCGACGACC AGTGCCTGGC CTGGCTCAAG GGCACCCAAG GGCCGTCTGG CCAAGGTGCA
ACCCCCCAGG AGTTCAGCGG CCTGCGCGAG GAGCTTGTCA GCCAGCTGGA AACCGGTGGC
ATAGAGCCGC TGCTCCTTCG GCTGCAAGGG CTGCAAGCCG GCGTTCGTGC TCCCCGTGAG
CGCTGCCACA CCACCGTGAT TGCAGCTGAT CTGCTGGCCG CGCGGGGTGT GTCCTGGCTG
GCCCAGGACC TGTGCGCCAA CGTTGCCCGA ACCATGCAGC AAACCACCGC CAGTGCGTGG
GAGCCCGAGG TGTTTGAGCG GCTTCAGCAG TACGCGGCAT CCCCAGTGTT GGCAGTTCAA
GACAAGGATC AGGAGCCTCG ATGA
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| Protein sequence | MSVVAQVSGE EVTRLLAPID PAVPAGLFDV EDETYQAIDQ EMVKLGGLQE ASIDWVYIED
ASRQYLSQQC KHLRIVAHLS AAWLRSGCWE QWGCTLALLA GMLECYWEAA HPKPGPKGFL
GKRKLVALVI DRLAEALPRL DRFTYTPTHA AAAQAALKRL QQQETVQLDT AALGELERLL
GKYSELANGV GEAAVPKAPA ATEKPAPLAD VIATPVSRMS MGNERETRRA VLSMAELINQ
QDPYDATGYQ LRRFGLWAHI QVAPQVRQGN RTELMAVPLD ITRFYEEAIA SKAVDPALLQ
RIEKSLTACP FWIRGSFLAA TVATQLAMCE VAEAIRCATA RFVQRMPSLQ QLCFSDGMVF
VDDQCLAWLK GTQGPSGQGA TPQEFSGLRE ELVSQLETGG IEPLLLRLQG LQAGVRAPRE
RCHTTVIAAD LLAARGVSWL AQDLCANVAR TMQQTTASAW EPEVFERLQQ YAASPVLAVQ
DKDQEPR
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