| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2625 |
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| Symbol | |
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| ID | 1046014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3001274 |
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| End bp | 3001969 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637146047 |
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| Product | hypothetical protein |
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| Protein accession | NP_744769 |
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| Protein GI | 26989344 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03360] type VI secretion-associated protein, VC_A0118 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0930026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCGCCATA TAGGCCATTT GTACTATTCA GAGAGTAAAT TCAGGATGAT TAACCGCTGT
GTATATGGCG CCGGTCTCTC GTTGCTGTTT TGTCTGCAGC CGGTGCTGGC AGGCTCCACG
CGGGACTGTC CCCGGATTGT TTCCAACGTC GAGCGACTGG CCTGTTTCGA TCAGGCTGCT
GGCACCCCGG CGTACACGCC AAAACGGCAG TGGTCTGCAC CGGAGCAGCA GGCCCCCACG
GTGTTGCGTG TGATGGCAAA TGAAGCTGAA CGGGCACCGG ATGACCTGAC GTTTCGCATC
GGGAGTCAGA CCCAGGACGG GGCAGGCGCG CCAGCGCTTG TGATTTCGGC GCCCGCCATC
GCATCGGGTG ATGAACGTGC CTACATGGCA ATCAGTTGCA TACAGGCCAT CTCCCGGCTA
CAGCTGATTG CCAGGCGTCC GATCGAGGCA AGCTGGGTCA AGGTACGCCT GAGCGGGGAG
GGCTGGTCTA CCCGTGAGAC GCCCTGGCAA GTGATGGAGA ACGGCCAAGT GCTCGATGCC
GGGCGGGGCC TGCCCGCCAT CGAGCAGATC AGGAAGCTGA TCGGTGCCCA GCGTATCGAG
GTTGTGAGTG ATCACGGCGA GGTCGACGGG CTGACCTTCG ATGCGCAAGG CCTGGCCCCC
TTGATCAGCC GGGCGCGAAG CACATGTCGG TGGTAG
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| Protein sequence | MRHIGHLYYS ESKFRMINRC VYGAGLSLLF CLQPVLAGST RDCPRIVSNV ERLACFDQAA
GTPAYTPKRQ WSAPEQQAPT VLRVMANEAE RAPDDLTFRI GSQTQDGAGA PALVISAPAI
ASGDERAYMA ISCIQAISRL QLIARRPIEA SWVKVRLSGE GWSTRETPWQ VMENGQVLDA
GRGLPAIEQI RKLIGAQRIE VVSDHGEVDG LTFDAQGLAP LISRARSTCR W
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