| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2617 |
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| Symbol | |
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| ID | 1046006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2993071 |
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| End bp | 2994408 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637146039 |
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| Product | hypothetical protein |
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| Protein accession | NP_744761 |
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| Protein GI | 26989336 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.500578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0201893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAC GCAATCCCGT TCTCTGGCCC GAAGGCCTGT TCGTCAAACC ACAGCATTTC
CAACAGGCGG CCAGGGCCAG CGAAGCAGCC CTGCACCAGC GCCTCGCCAG CCTCAATGCA
GCCTTTTACG GCTTCAGCGA ACTTCAGTTG AACGACGAAT ACCTGAGCCT GGGCAAAGTC
GCCATCACCC GGGCGCGAGG TGTGATGCCG GACGGCACGG TGTTCGACAT TCCCGCCGAC
CTGCCGCCAC CGCCGCCGCT GGAAATCGGC GACGACGCGT GCCAAGACAG TGAGGTGTAT
CTGTGCCTGC CGCTGCGTAC CGATGGCGGC CGCGAAGTGA GCTGGCCCGA CAATGCAGCC
AATTTCCGCT ATACCGCTCA GGTACAGGAA ATCAAGGATA CCCACTCCGC TGACGGTGAC
CTGGTGCAGG TAGACCTTGC GGTGCCCAAC CTGCAGCTCA AACGCAAGAC CGAAGACAGC
AGCGCCTACA CCCGCCTGGC CCTGGCACGT ATTCTGGAAC GGCGCCCCGA CGGCAGCCTG
CAACTGGACG AAGCGTTCTA CCCCACCAGC GTTTCGGTGC GGGCGGTGCC AGCGCTGCAG
CGGTTTCTAG AGGAAATCAC CCATACCTTG CGCGAGCGGG CGCGCGGCCT TGCCACGCGG
ATTGGTGCCT CGGGCCAGTC CGGGATCGCC GACATTCGCG ACTTCAACCT GCTGCAGGCC
ATGAACCGTT GGTGGCCATG CTTCCAGCAT CTGGCCAGGC AAGCGCAAAC GCACCCCGAG
CAGCTGTACC TGTGCATGAG CCAGGCCTGC GGCGAATTCG TCACCTTCAC CGACCAGAAC
CGGCTGCCGC AGGAGTACCC CGCCTATCAC CACACCGCAC TGCGCACGTC TTTCAAACCG
CTGGAAGATA CCTTGCGCCG GTCTCTGAGC ACCGTCTTGC GGCCACGCGC TGTTTCACTA
CCGCTGGAGA GCGAACAATT CGGCGTGATG ACGACCACGC TGGAAGACCG CCGGCTGATC
GACGAAGCCG ACTTCATCCT CGCCGTGCGC GCCAGCATGC CACCACAGGC GTTGCGCCAG
ATGTTCATCC AGAAAGCCAA GATCACCTCA CTTGAGTCAC TGAATGACCT GGTGCCGCTG
CAATTGCCGG GCATCCCTTT GCTGCCATTA CCCGTGGCGC CCCGCGACCT GCCCTTCCAT
GCGGGTTTCA GCTACTTCGA GCTGGACCGA CGTGACCCGG CCTGGGCGTG CATGAGCAAG
GCGAATGGCT TCGGCATCCA CATTGCGGGC GACTTCCCAG GGCTTGAACT GCAGTTCTGG
GCGATCAGGA GTGAGTGA
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| Protein sequence | MSSRNPVLWP EGLFVKPQHF QQAARASEAA LHQRLASLNA AFYGFSELQL NDEYLSLGKV
AITRARGVMP DGTVFDIPAD LPPPPPLEIG DDACQDSEVY LCLPLRTDGG REVSWPDNAA
NFRYTAQVQE IKDTHSADGD LVQVDLAVPN LQLKRKTEDS SAYTRLALAR ILERRPDGSL
QLDEAFYPTS VSVRAVPALQ RFLEEITHTL RERARGLATR IGASGQSGIA DIRDFNLLQA
MNRWWPCFQH LARQAQTHPE QLYLCMSQAC GEFVTFTDQN RLPQEYPAYH HTALRTSFKP
LEDTLRRSLS TVLRPRAVSL PLESEQFGVM TTTLEDRRLI DEADFILAVR ASMPPQALRQ
MFIQKAKITS LESLNDLVPL QLPGIPLLPL PVAPRDLPFH AGFSYFELDR RDPAWACMSK
ANGFGIHIAG DFPGLELQFW AIRSE
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