Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2600 |
Symbol | |
ID | 1045988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2972158 |
End bp | 2973870 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637146022 |
Product | putative FAD-binding dehydrogenase |
Protein accession | NP_744744 |
Protein GI | 26989319 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.742686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0811196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCCG CTCCTCTCGA AACCGAATGC GATGTACTGG TCATAGGTTC TGGCGCCGCC GGGCTGGCGG CGGCCGTCAC GGCTGCCTGG CATGGGCAGA AGGTGATCGT GGCGGAGAAA GAACCGGTGT TTGGCGGTGC CACCGCCTGG TCCGGCGGCT GGGCCTGGGT GCCACGCAAC CCGCTGGCGC GCAGGGCCGG CATCGAGGAA GACATCGAAC AGCCGCGGAC TTATCTGCGC CATGAGCTGG GGGCAAACTA CAATGCCGAG CGCGTCGATG CCTTCCTTGA GGCGTGCCCG CATATGGTGG CGTTTTTCGA GAAGTACACG GCGTTGCAGT TTGCCGACGG CAACGGCATC CCGGACATGC ATGGCGATAC GCCAGGCGCA GCCCTTGGCG GCCACCAGGT GATCGCCGCG CCCTACGATG CCCGCGAGGT TGGCGCCCTG CTGCCACGCT TGCGCAAGAC CATGCGCGAA ACCTCGTTCA TGGGCATGCC GATCATGGCC GGTGCCGACC TTGCCGCCTT CCTCAACATG ACCCGCTCGC CCAAAGCCCT GCTGCACGTG TGCAAGCGCT TTGGCCGCCA CCTGTACCAC CTGGCCCGCC ATGGTCGGGC CATGCACCTG GTCAACGGTG TGGCACTGGT GGCGCGCCTG GCTAAATCGG CACAGGACCT GGGTGTGCAC CTGCAAGCGT CGGCGCCGGC CAAACGCCTG CTGATCGAGG GTGGCCAGGT GCGCGGGGCG TGGGTCGCGA CGCCACAGGG CGAGCAGCTG ATCCGCGCCA AGGCCGTGGT GCTGGCGGCA GGCGGTTTCC CCAATGACAA CGCCCGGCGC CAGCAACTGT TCCCGCGCGA TGCCAGCGGC CACGACAACC TGGCGCTGCC GCCCAAGGGG TGTTCTGGCG ATGGCCTGCG GCTGGGCGAG TCCGCCGGCG GCGTGGTTGC CACCGACCTG AAGTCGCCAG TGGCCTGGGC ACCGGTTTCA CAGGTGCCGT ATCGCGACGG CAGCGTCGGC CACTTCCCGC ACATTATCGA GCGCGGCAAA CCGGGCGTTA TCGGCGTGCT GGCCAACGGC AAGCGTTTCG TCAACGAAGC GCATGGCTAT TACGACTATG TGTCGGCCAT GGTCGCTGCA GTGCCGCAGG GCCAGGAGGT GTGCTCGTGG CTGGTTTGCG ATCATCGCTT CTTGCGCCGC TATGGCCTGG GGCATGCCCG CCCGGCACCG CTGCCGGTAG GGCCGCATGT GCGCAACGGC TACCTGAAAC GCGGCGCTAC GCTCGAGCAG CTCGCCCAGG CCTGCGGCAT TGACCCGTCC GGGCTGCGCG CCACGGTCAC TGACTTCAAT ACCCATGCCC GTAACGGCCA GGACCCGGCG TTTGGCCGCG GTTCCACGCC GTTCAACCGC AAGCAGGGTG ACCCACAGCA CAAGGGCCCT AACCCTTGCG TGGCGCCCAT CGAGCACGGG CCGTTCTATG CGGTGAAAGT AAAGCCCGGC TGTTTTGGCA CCTTTGCCGG GTTGCGCACC GACGGCAATG CCCGTGTACT GGATGAGGCG GGGCAACCGA TTGCAGGCCT GTATGCAGCA GGTACCGACA TGGCCAGCGT GTTTGGTGGC TGGTACCCGT CGGGCGGCAT CAACCTGGGG CCGGCGCTGA CCTTTGGCTA TGTCGCCGGG CGGCACATTG CCGGGGTGCA GGGGTATGAG TGA
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Protein sequence | MPSAPLETEC DVLVIGSGAA GLAAAVTAAW HGQKVIVAEK EPVFGGATAW SGGWAWVPRN PLARRAGIEE DIEQPRTYLR HELGANYNAE RVDAFLEACP HMVAFFEKYT ALQFADGNGI PDMHGDTPGA ALGGHQVIAA PYDAREVGAL LPRLRKTMRE TSFMGMPIMA GADLAAFLNM TRSPKALLHV CKRFGRHLYH LARHGRAMHL VNGVALVARL AKSAQDLGVH LQASAPAKRL LIEGGQVRGA WVATPQGEQL IRAKAVVLAA GGFPNDNARR QQLFPRDASG HDNLALPPKG CSGDGLRLGE SAGGVVATDL KSPVAWAPVS QVPYRDGSVG HFPHIIERGK PGVIGVLANG KRFVNEAHGY YDYVSAMVAA VPQGQEVCSW LVCDHRFLRR YGLGHARPAP LPVGPHVRNG YLKRGATLEQ LAQACGIDPS GLRATVTDFN THARNGQDPA FGRGSTPFNR KQGDPQHKGP NPCVAPIEHG PFYAVKVKPG CFGTFAGLRT DGNARVLDEA GQPIAGLYAA GTDMASVFGG WYPSGGINLG PALTFGYVAG RHIAGVQGYE
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