| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2559 |
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| Symbol | hasE |
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| ID | 1045922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2907351 |
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| End bp | 2908691 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637145982 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | NP_744704 |
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| Protein GI | 26989279 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.188879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGA CTCAACATGC CGAACTGATC CCCGCCGAGA GCAGCCACCT GATCGATCTG
GACGCGGGCC GCCCGGTACG CTGGGGCGTA TGGCTGGTCA TCGCCGGCTT CGGCGGTTTC
CTGCTGTGGT CCTGCCTGGC GCCACTGGAC GCCGGCGTGG TCGCCACCGG TACGGTCAAG
GTCACCAGCA ACCGAAAGGC AGTCCAGCAC CTGAGCGGTG GCACCGTTGA AGCGATCATG
GTGCGCGAAG GCGATGTGGT GAAGAAAGGC CAGGAAGTGG TGCGCCTCGA TGCCCTGCGT
GCGGTGGCCG AGCAAGGCGC ACTCAGCGCC CAGTACATCG TCAGCAAGAC CGTGGAAAAC
CGCCTGGAAG CCGAGCGCGA TGGCCGCGAT ACCGTCACGT TCGACCCCGC CCTGCTTGAA
CACTACGCCA ATGACCCACG CCTGCTGGCC GCCATGGACC TGCAACAGCG CCTGCTCGAT
ACCCGCCGCG CGGGCCTTGC CGGTGAACTG AGCATCCTTG AAGAAAACCT CACGGCCTCG
GCAGTGCAAC TGAAGGGCCT GCAGCAGGTG TACGGCGCCC GCGCCTCGCA GATCGGCTTC
CTCAACCAGG AACTGCAAGG CACCCGGGTC CTGGCCGCCG AAGGTTATGT ACCCCGCAAC
CGCCTGCTGG AGCTGGAACG CAGCAATGCC GACCTGTCCG CCGGCCAGGC CGAAAACCTC
AACAACATTG CCCGGGCGCG CAGCCAGGCC ACCGAGATCA AGCTGCGCAT TCTGCAGCGC
CAGCACGACT ACCTGAAGGA GGTGGAGTCG CAACTGACCG ATACCGCCAA GGAAAACACC
ACCCTGGCCG ACCGCTTGCG CGCACTGGAC TATGAAGTGA CCCACACGGT GATCCGCTCG
CCGATCGACG GCATGGTCCA GGGCCTGAGC ATCGCCACGG TCGGCGGCAT CATCCAGCCC
GGGGCCAAGA TCATGGAAGT GGTACCGCTC GACCAGCCGC TGCAGGTCGA TGCGATGATC
CCGGTGCAGG CGATCGACAA GATGGTCCCA GGCCTTGCCG TGGACATCGC CTTCCCGGCC
TTCAACCATG CGCAGACGCC GAACATTCCC GGCCGGGTAA AAACCATTTC CGCCGACCGG
CTGCTCGACG AAGAAAGCAA GCAGCCGTTC TACCTGGCCC AGGTGGAAGT GACGCCGGCC
GGCATGGGCT TGCTGGGCAG CAACCACATC CGCCCCGGCA TGCCCGCCAC CGTCACCATC
AAGACCGGCG AGCGCAACCT GCTCAGCTAC CTGCTCAAAC CAATGCTCGA ACGTGTGGAC
GCCGCGTTCA AGGAGCAATG A
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| Protein sequence | MQMTQHAELI PAESSHLIDL DAGRPVRWGV WLVIAGFGGF LLWSCLAPLD AGVVATGTVK
VTSNRKAVQH LSGGTVEAIM VREGDVVKKG QEVVRLDALR AVAEQGALSA QYIVSKTVEN
RLEAERDGRD TVTFDPALLE HYANDPRLLA AMDLQQRLLD TRRAGLAGEL SILEENLTAS
AVQLKGLQQV YGARASQIGF LNQELQGTRV LAAEGYVPRN RLLELERSNA DLSAGQAENL
NNIARARSQA TEIKLRILQR QHDYLKEVES QLTDTAKENT TLADRLRALD YEVTHTVIRS
PIDGMVQGLS IATVGGIIQP GAKIMEVVPL DQPLQVDAMI PVQAIDKMVP GLAVDIAFPA
FNHAQTPNIP GRVKTISADR LLDEESKQPF YLAQVEVTPA GMGLLGSNHI RPGMPATVTI
KTGERNLLSY LLKPMLERVD AAFKEQ
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