| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2552 |
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| Symbol | |
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| ID | 1045854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2897773 |
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| End bp | 2899185 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637145975 |
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| Product | aromatic-L-amino-acid decarboxylase |
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| Protein accession | NP_744697 |
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| Protein GI | 26989272 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00803752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGACCCCCG AACAATTCCG CCAGTACGGC CACCAACTGA TCGACCTGAT TGCCGACTAC
CGCCAGACCG TGGGCGAACG CCCGGTCATG GCCCAGGTCG AACCTGGCTA TCTCAAGGCC
GCCTTGCCCG CAACTGCCCC TCAACAAGGC GAACCTTTCG CGGCCATTCT CGACGACGTC
AATAACCTGG TCATGCCCGG CCTGTCCCAT TGGCAGCACC CGGACTTCTA TGGCTATTTC
CCTTCCAATG GCACCCTGTC CTCGGTGCTG GGGGACTTCC TCAGTACCGG TCTGGGCGTG
CTGGGCCTGT CCTGGCAATC CAGCCCGGCC CTGAGCGAAC TGGAAGAAAC CACCCTCGAC
TGGCTGCGCC AGTTGCTTGG CCTGTCTGGC CAGTGGAGTG GGGTGATCCA GGACACTGCC
TCGACCAGCA CCCTGGTGGC GCTGATCAGT GCCCGTGAAC GCGCCACTGA CTACGCCCTG
GTACGTGGTG GCCTGCAGGC CGAGCCCAAG CCTTTGATCG TGTATGTCAG CGCCCACGCC
CACAGCTCGG TGGACAAGGC TGCACTGCTG GCAGGTTTTG GCCGCGACAA TATCCGCCTG
ATTCCCACCG ACGAACGCTA CGCCCTGCGC CCAGAGGCAC TGCAGGCGGC GATCGAACAG
GACCTGGCTG CCGGCAACCA GCCGTGCGCC GTGGTTGCCA CCACCGGCAC CACGACGACC
ACTGCCCTCG ACCCGCTGCG CCCGGTCGGT GAAATCGCCC AGGCCAATGG GCTGTGGTTG
CACGTTGACT CGGCCATGGC CGGTTCGGCG ATGATCCTGC CCGAGTGCCG CTGGATGTGG
GACGGCATCG AGCTGGCCGA TTCGGTGGTG GTCAACGCGC ACAAATGGCT GGGTGTGGCC
TTCGATTGCT CGATCTACTA CGTGCGCGAT CCGCAACACC TGATCCGGGT GATGAGCACC
AATCCCAGCT ACCTGCAGTC GGCGGTGGAT GGCGAGGTGA AGAACCTGCG CGACTGGGGG
ATACCGCTGG GCCGTCGGTT CCGTGCGTTG AAGCTGTGGT TCATGTTGCG CAGCGAGGGT
GTCGACGCAT TGCAGGCGCG GCTGCGGCGT GACCTGGACA ATGCCCAGTG GCTGGCGGGG
CAGGTCGAGG CGGCGGCGGA GTGGGAAGTG TTGGCGCCAG TACAGCTGCA AACCTTGTGC
ATTCGCCATC GACCGGCGGG GCTTGAAGGG GAGGCGCTGG ATGCGCATAC CAAGGGCTGG
GCCGAGCGGC TGAATGCATC CGGCGCTGCT TATGTGACGC CGGCTACACT GGACGGGCGG
TGGATGGTGC GGGTTTCGAT TGGTGCGCTG CCGACCGAGC GGGGGGATGT GCAGCGGCTG
TGGGCACGTC TGCAGGACGT GATCAAGGGC TGA
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| Protein sequence | MTPEQFRQYG HQLIDLIADY RQTVGERPVM AQVEPGYLKA ALPATAPQQG EPFAAILDDV
NNLVMPGLSH WQHPDFYGYF PSNGTLSSVL GDFLSTGLGV LGLSWQSSPA LSELEETTLD
WLRQLLGLSG QWSGVIQDTA STSTLVALIS ARERATDYAL VRGGLQAEPK PLIVYVSAHA
HSSVDKAALL AGFGRDNIRL IPTDERYALR PEALQAAIEQ DLAAGNQPCA VVATTGTTTT
TALDPLRPVG EIAQANGLWL HVDSAMAGSA MILPECRWMW DGIELADSVV VNAHKWLGVA
FDCSIYYVRD PQHLIRVMST NPSYLQSAVD GEVKNLRDWG IPLGRRFRAL KLWFMLRSEG
VDALQARLRR DLDNAQWLAG QVEAAAEWEV LAPVQLQTLC IRHRPAGLEG EALDAHTKGW
AERLNASGAA YVTPATLDGR WMVRVSIGAL PTERGDVQRL WARLQDVIKG
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