Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2549 |
Symbol | |
ID | 1045838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2894339 |
End bp | 2895730 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637145972 |
Product | hypothetical protein |
Protein accession | NP_744694 |
Protein GI | 26989269 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR03329] putative aminophosphonate oxidoreductase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.165188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00741775 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGACCCT TCTGGCTGCA ACAGGCCCTG GATTCTGCGC AGGAGGCGGT ATGCCCGCCG CTGCAAGGCG ATACCCGTTG CGATGTGTGC ATTGTCGGCG GTGGGTACAC CGGCCTGTGG ACGGCGCTGA TGCTCAAGGA AGCGGTACCG GCCCTGGATG TGGTGCTGAT CGAGGCCGAC ATCTGTGGTG CCGGTGCCAG CGGCCGCAAT GGGGGCTGTG CGTTGTCCTG GTCGGCCAAG TACTTCACCC TCGAACGCCT GTTCGGGGGG GCGGAGGCGG TGCGGCTGGT GCGTGAGTCG GAGCGCAGCA TTACAGACAT CGGGGTGTTC TGCGCGGCCA ATGGCATCGA CTGCGACTTC CGCCTGGACG GCACGCTGTA CACGGCCACC AACGCAGCCC AGGTCGGTGC CACCGACGCG GTGATCGCCG CGCTGGAGCA CAAGGGCATC AACTCGTTCC GCCGCTTGCC GCTGGAGCAG GTGCAGCGCC TGGCCGGTTC TGCACGGCAC CTGGAGGGCT GGTTCTCGCC GGCCGCCGCC ACCGTGCAGC CGGGCAAACT GGTGCGCGGC CTGCGCCGGG TGGCCTTGCA GCGCGGCGTG CGCCTCTACG AAGGCACCGC CATGACCGGC CTGGAGCACG GCGCCCCGGT GCAGGTACGC ACGGCCCACG GCACACTGCG CGCCGACCGT GTAGTGCTGG GCCTCAATGC CTGGATGGCG CGCGTCTTCC CGCAGTTCGA GCGCAGTGTG GCGATCGTTT CCAGCGACAT GGTCATTACC GAACCGTGCC CCGAGCTGCT GCGCCAGATC GGCCTGGACA GCGGGATCAG CGTGCTCGAC TCGCGTATTT TCGTGCACTA CTACCACAAC ACCTCCGATG GCCGGCTGAT GCTCGGCAAG GGCGGCAACA CGTTTGCCTA TGGCGGGCGC ATATTGCCGG TATTCGACCA GCCGTCGCCG TATCGGCGGT TGCTGCGCGA AAGCCTTGGC GGCTTTTTCC CGGCCTTGGC CGAGGTGCCA CTGGCGGCCA GCTGGAACGG GCCGTCCGAT CGATCAGTAA CCGGCCTGCC GTTCTTTGGT CGGTTGGATG GGCAGGGCAA CGTGTTCTAT GGCTTTGGTT ACTCCGGCAG CGGTGTTGGC CCGTGCCACA TGGGCGGGCA GATTCTTTCG TCGCTGGCGC TGGGGCTGGA CAACCCGTGG ACCCGGTCGC CGCTGGTCAA AGGGCCGCTG GGGCTGTTCC CGCCCGAGCC GATCCGCTAC CTGGGTTCGC TGATGGTGCG CAATGCCATC CGCCGCAAGG AGCAGGCCGA AGATCGTGGT GTGCGCCCGC GAAGGCTGGA CGTGCGGTTG GCGCGGTTTG CCGCAGCGGC GGGCAAGGCC GATAAAGGCT GA
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Protein sequence | MRPFWLQQAL DSAQEAVCPP LQGDTRCDVC IVGGGYTGLW TALMLKEAVP ALDVVLIEAD ICGAGASGRN GGCALSWSAK YFTLERLFGG AEAVRLVRES ERSITDIGVF CAANGIDCDF RLDGTLYTAT NAAQVGATDA VIAALEHKGI NSFRRLPLEQ VQRLAGSARH LEGWFSPAAA TVQPGKLVRG LRRVALQRGV RLYEGTAMTG LEHGAPVQVR TAHGTLRADR VVLGLNAWMA RVFPQFERSV AIVSSDMVIT EPCPELLRQI GLDSGISVLD SRIFVHYYHN TSDGRLMLGK GGNTFAYGGR ILPVFDQPSP YRRLLRESLG GFFPALAEVP LAASWNGPSD RSVTGLPFFG RLDGQGNVFY GFGYSGSGVG PCHMGGQILS SLALGLDNPW TRSPLVKGPL GLFPPEPIRY LGSLMVRNAI RRKEQAEDRG VRPRRLDVRL ARFAAAAGKA DKG
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