| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2543 |
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| Symbol | |
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| ID | 1045826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2888990 |
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| End bp | 2890402 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637145966 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | NP_744688 |
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| Protein GI | 26989263 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0431573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAA CATCCACAAC CACCACCGCG AAAAGCGGGC ACGAGAGCAA GCTCAGTGCC
TCGCTGAAGT CGCGCCACCT GACGATGATG TCGATCGCCG GGGTTATCGG CGGCGCCTTG
TTCGTCGGTT CCGGCAGCGT GATCCACAGC GCCGGCCCAG CCGCTGTCCT GGCCTACCTG
GCAGGCGGCA TCCTGGTGGT GCTGATCATG CGCATGCTGG GTGAAATGGC GACTTCCTCG
CCTGACACCG GCTCGTTCTC GACCTACGCC GACCGCGCCA TTGGCCGTTG GGCCGGTTTT
ACCATCGGCT GGCTGTACTG GTGGTACTGG GTCATCCTCA TGGCCTGGGA AGCCTATGTG
GCGGGCAAGA TCCTGCATGG CTTCTTCCCC GACGTCAGCG TCAACGTGTT CGTGCTGGCC
ACAACCCTGT TGCTGATCAC CGTCAACTTC TTCAACGTCA AGCACTACGG TGAGTTCGAG
TTCTGGTTCG CCTTGATCAA GGTGATTGCG ATCGTCTGCT TCCTGATCGT GTGTACGGCT
GCCGTGATGA ACATCTGGCA GTTCGGTGAA GTGCGTGGCA TCAGCCACCT CACCGCCGAA
GGCTTCATGC CCAATGGCAT CACCACTGTG ATCGGTGCCT TGCTCGGGGT GATGTTCGCC
TTCCTCGGCG CCGAAATCGT TACCATCGCG GCCTCCGAAG CCAAGGACCC GGCTGCGCAG
ATCGTCAAGG CGACCAACTC GGTGGTCTGG CGTGTGTGCC TGTTCTACGT CGGCTCGATC
TTCCTGATCG TCTGCCTGGT ACCGTGGAAC GACCCGCACC TGGGTGTTTC TGGCTATGGC
GCTTATCGCC GTACCCTGGA GCTGCTGGGG GTGCCGTATG CCGAGCTGTT GATGAACTTC
GTGGTGCTGA CTTCCGTGAG CAGCTGCCTG ATCTCCGGCC ACTACACCGC TTCGCGCATG
CTGTTCTCCC TGGCCCAGCG TGGCGACGCG CCGTCGTTCT TCAAGATCAC CCGCGCCGGT
ACCGGTGTAC CGGTGTACGC GATCATGGGT TCGTGCGCCG TGGCCGTGGT ATGTGCATTG
ATCAACTTCA GCGAGACCCT GCGCCCGAAA GACGTGCTGG ACACCCTGAT GAACACCACC
GGCATGATCG CCCTGCTGGT GTACCTGGTC ATCGCCTTCT CGCAGCTGCG CATGCGCCGC
AAGCTGATTG CCGAGGGCAA GGAAGTACGC CTGAAGATGT GGCTGTTCCC GTGGCTGACC
TACCTGGTGA TCGCGTTCAT CGTGGCTGCC CTGGTCACCA TGGCCTTCAT GCCTGACTAC
CAGATCCTGG TCATTTCCAC CGGTATCGCT GCGGCGGTCG TGGTGGCGAT GGGTGTGGTG
CACCAGATCC GCTCTGGTAG CAAGCAGCAC TAA
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| Protein sequence | MDATSTTTTA KSGHESKLSA SLKSRHLTMM SIAGVIGGAL FVGSGSVIHS AGPAAVLAYL
AGGILVVLIM RMLGEMATSS PDTGSFSTYA DRAIGRWAGF TIGWLYWWYW VILMAWEAYV
AGKILHGFFP DVSVNVFVLA TTLLLITVNF FNVKHYGEFE FWFALIKVIA IVCFLIVCTA
AVMNIWQFGE VRGISHLTAE GFMPNGITTV IGALLGVMFA FLGAEIVTIA ASEAKDPAAQ
IVKATNSVVW RVCLFYVGSI FLIVCLVPWN DPHLGVSGYG AYRRTLELLG VPYAELLMNF
VVLTSVSSCL ISGHYTASRM LFSLAQRGDA PSFFKITRAG TGVPVYAIMG SCAVAVVCAL
INFSETLRPK DVLDTLMNTT GMIALLVYLV IAFSQLRMRR KLIAEGKEVR LKMWLFPWLT
YLVIAFIVAA LVTMAFMPDY QILVISTGIA AAVVVAMGVV HQIRSGSKQH
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