| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2542 |
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| Symbol | |
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| ID | 1045824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2887241 |
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| End bp | 2888665 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145965 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | NP_744687 |
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| Protein GI | 26989262 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0371084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0434236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAT TACATCCAGA CTCCTCTACC CCGCTGGTCA ACCAGATCAT CGATGGGCTG
CGCGAGCTGA TCGACAACCA AACCCTCAAG CCAGGCGCCA AGGTCCCGTC GATTCGCGCC
TTTGCCGCAA GCTATTCGGT GAGTACCTTC ACCGTGGTAG AGGCCTACGA CCGCCTGGTC
GCCCAAGGGC TGCTGGTGAG CCGTGGCAAT GCGGGGTTCT TCGTCAACCG TGCGGCGGGC
GAACTGCTGG AGCAGCACAA CACCGAGGCC GACACCAGTC GACCAACGTT CAACTCCGAG
TGGTACCTGC AGCAGATTTT CGAAATCCGC CAGTTGCCGT ACAAACCGGG GTGCGGCTGG
CTGCCCAACG ACTGGATGTA CGAAGACGGC CTGCGCCGCG GTCTGCGCCA GGTGGCCGGC
AGCCCGCTGG AGCTGTCGGG GTACGGCGAC CCCATGGGCC TGATGGAGCT GCGTGCACTG
ACCGCACAGA ACCTGCAACA AGAGCTGTCG ATCGTCGCCA ACCCGGCACA GCTGATGCTC
ACCCACGGCG CCAGCCAGGC CCTGGACCTG GCCGCACGCA CACTGGTGCG CCCAGGCGAT
GTGGTGCTGG TGGACGACCC CGGCTACCCG AACCTCATGA GCATCCTGCG CACCCAAGGC
GCAACCCTGG TAGGCGTGCC ACGTACACCG GCCGGCTACG ACCTGAACCA GCTGGAGCAA
CTGCTCAGCC ACCACCGCCC GACGGCGTTC TTCACCCAGC CGCACCTGCA CAGCCCGACG
TGCTCCCGCA CCCCGCTGCC GCAGTTGCAC CGCCTGCTGC AGCTTGCTAG CCAGCATGGC
TTCCGCCTGG TGGAGAACAA CCTGTACGCC GACATGGTCG CCGAGCCGCA GCCGTGCCTG
GCCAGCCTCG ACCATCTGCA GCAGGTGGTG TACGTGGGCA GCTATTCCAA GAGCATTTCG
CCCAACGTGC GGGTCGGCTA CATGCTGGCC AACCCCGAAC TGATGCAAAA ACTGCTGCAC
CTGAAGATGC GCTCAGGCCT GACCACCTCG CAGGTGATGG AGCGCGTGGT GTATGCGGCG
ATCATCGACG GGCGCTGGCG CAAGCACCTC AAGCGCCTGC GCCAGCGCCT GGCCGAGGCG
CATCAGGAAG TTGGCCGGCA TCTGCATCGA CTGGGCTTTG AATTGTTCAC CGAATCGGAT
GAAGGCATGT ACATCTGGAC CCGCCATCCG GCGATTCCCG ACAGTGCCGC GTTGCTGGAC
GATGCGCTGG AGAAAGGCAT CATGCTAGGC CCAGGGCAGT TGTTCATGGT CGACGCCAAG
GCGACCGGGT GGATGCGGTT CAACGTGGCG TTCAGTACGG ACCCGGCGAT GTGGGAGTTG
TTGGAGAAGG TGTTGGTGAA GCATGTGCGG CGGAGTGGGA TGTAA
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| Protein sequence | MFELHPDSST PLVNQIIDGL RELIDNQTLK PGAKVPSIRA FAASYSVSTF TVVEAYDRLV
AQGLLVSRGN AGFFVNRAAG ELLEQHNTEA DTSRPTFNSE WYLQQIFEIR QLPYKPGCGW
LPNDWMYEDG LRRGLRQVAG SPLELSGYGD PMGLMELRAL TAQNLQQELS IVANPAQLML
THGASQALDL AARTLVRPGD VVLVDDPGYP NLMSILRTQG ATLVGVPRTP AGYDLNQLEQ
LLSHHRPTAF FTQPHLHSPT CSRTPLPQLH RLLQLASQHG FRLVENNLYA DMVAEPQPCL
ASLDHLQQVV YVGSYSKSIS PNVRVGYMLA NPELMQKLLH LKMRSGLTTS QVMERVVYAA
IIDGRWRKHL KRLRQRLAEA HQEVGRHLHR LGFELFTESD EGMYIWTRHP AIPDSAALLD
DALEKGIMLG PGQLFMVDAK ATGWMRFNVA FSTDPAMWEL LEKVLVKHVR RSGM
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