Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2517 |
Symbol | |
ID | 1045767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2864147 |
End bp | 2865379 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145943 |
Product | BenF-like porin |
Protein accession | NP_744665 |
Protein GI | 26989240 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.274233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGCC GCACCCTGTA CCCGCTCGTC CCCACATTCG CACTGGCAGC CAGCCTGCCA CTGCAAGCCC TGGCCGAAGG CTTCGTCGAC GATGCCAAGG CAAGCCTGAC GTTGCGTAAC TTCTACATGA ACCGCGACTA CACGGGCACG GCAAGCCAAG GCAAAGCCGA GGAATGGACG CAAAGTTTCA TCTTCGACTT CAAGTCCGGC TACACCCCCG GCGTGGTCGG TTTCGGCGTT GACGTGCTGG GCCTTTACAG CATCAAACTC GATGGCGGCA AGGGCACCGC CGGCACGCAA TTGCTGCCTG TTCACGACGA CGGGCGCCCG GCGGACGACT TTGGCCGCAC GGCGCTGGCG GGCAAGATGC GGGTTTCCAG GACCGAACTC AAGGTCGGCG AGTGGTCACC CACCCTGCCC ATCCTGCGCG CCGATGACGG CCGCTCGCTG CCACAAACCT TGCAGGGCGC GCAGGTCACC TCCAACGAGC TGGCCGGCCT GAGCCTGTAT GGCGGCCAGT TCCGCCAGAA CAGCCCGCGC AACGACGCCA GCATGCAGGA CATGAGCCTG TTCACGCGCA CAGCCTTCAC CTCGGACCGT TTCAACTTCG CCGGCGGCGA ATACCGCTTC AACCAGGAGC GCACCCTGGT CGGCGCCTGG TATGCCCAGC TGGAAGACAT CTACCAGCAG CGCTACTTCC AGGTGCAGCA TCAACAGCCG CTGGGCAACT GGGTACTGGG CGCCAACCTG GGCTACTTCT GGGGCAAGGA CGACGGTGGC GCCAAGGCAG GCGAACTGAA CAACCGCACC GCTTCGGGCC TGTTCTCGGC GAAGCTGGGT GGCAACACGT TCTACGTCGG CTTGCAGAAG GTCATGGGCG ATGATGAATG GTTCCGGGTC AACGGCGCCA GCGGCGGCAC GCTGGCCAAC GACGCCTTCG GCTCCAGCTA CGAAAGCGCC CGCGAACGCT CCTGGCAGGT GCGCCACGAC TTCAACTTCG TGGTGCTTGG CATACCCGGC CTGACCCTGA TGAACCGCTA CATCCACGGC TACAACGTGC ACAACGCCAG CACCCAGGGC CGCGAAAGCG AGCTGGCCTA TGTGGTCCAG TCCGGGCCGT TCAAGGCCCT GAACCTCAAG TGGCGCAACT CCAGCCAGCG CCGGGACTGG GGCAGCACCA ACAGTTTCGA TGAGAACAGG CTGATCGTCA GCTACCCGCT GAGCCTACTT TAA
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Protein sequence | MKCRTLYPLV PTFALAASLP LQALAEGFVD DAKASLTLRN FYMNRDYTGT ASQGKAEEWT QSFIFDFKSG YTPGVVGFGV DVLGLYSIKL DGGKGTAGTQ LLPVHDDGRP ADDFGRTALA GKMRVSRTEL KVGEWSPTLP ILRADDGRSL PQTLQGAQVT SNELAGLSLY GGQFRQNSPR NDASMQDMSL FTRTAFTSDR FNFAGGEYRF NQERTLVGAW YAQLEDIYQQ RYFQVQHQQP LGNWVLGANL GYFWGKDDGG AKAGELNNRT ASGLFSAKLG GNTFYVGLQK VMGDDEWFRV NGASGGTLAN DAFGSSYESA RERSWQVRHD FNFVVLGIPG LTLMNRYIHG YNVHNASTQG RESELAYVVQ SGPFKALNLK WRNSSQRRDW GSTNSFDENR LIVSYPLSLL
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