Gene PP_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2517 
Symbol 
ID1045767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2864147 
End bp2865379 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content64% 
IMG OID637145943 
ProductBenF-like porin 
Protein accessionNP_744665 
Protein GI26989240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.274233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGCC GCACCCTGTA CCCGCTCGTC CCCACATTCG CACTGGCAGC CAGCCTGCCA 
CTGCAAGCCC TGGCCGAAGG CTTCGTCGAC GATGCCAAGG CAAGCCTGAC GTTGCGTAAC
TTCTACATGA ACCGCGACTA CACGGGCACG GCAAGCCAAG GCAAAGCCGA GGAATGGACG
CAAAGTTTCA TCTTCGACTT CAAGTCCGGC TACACCCCCG GCGTGGTCGG TTTCGGCGTT
GACGTGCTGG GCCTTTACAG CATCAAACTC GATGGCGGCA AGGGCACCGC CGGCACGCAA
TTGCTGCCTG TTCACGACGA CGGGCGCCCG GCGGACGACT TTGGCCGCAC GGCGCTGGCG
GGCAAGATGC GGGTTTCCAG GACCGAACTC AAGGTCGGCG AGTGGTCACC CACCCTGCCC
ATCCTGCGCG CCGATGACGG CCGCTCGCTG CCACAAACCT TGCAGGGCGC GCAGGTCACC
TCCAACGAGC TGGCCGGCCT GAGCCTGTAT GGCGGCCAGT TCCGCCAGAA CAGCCCGCGC
AACGACGCCA GCATGCAGGA CATGAGCCTG TTCACGCGCA CAGCCTTCAC CTCGGACCGT
TTCAACTTCG CCGGCGGCGA ATACCGCTTC AACCAGGAGC GCACCCTGGT CGGCGCCTGG
TATGCCCAGC TGGAAGACAT CTACCAGCAG CGCTACTTCC AGGTGCAGCA TCAACAGCCG
CTGGGCAACT GGGTACTGGG CGCCAACCTG GGCTACTTCT GGGGCAAGGA CGACGGTGGC
GCCAAGGCAG GCGAACTGAA CAACCGCACC GCTTCGGGCC TGTTCTCGGC GAAGCTGGGT
GGCAACACGT TCTACGTCGG CTTGCAGAAG GTCATGGGCG ATGATGAATG GTTCCGGGTC
AACGGCGCCA GCGGCGGCAC GCTGGCCAAC GACGCCTTCG GCTCCAGCTA CGAAAGCGCC
CGCGAACGCT CCTGGCAGGT GCGCCACGAC TTCAACTTCG TGGTGCTTGG CATACCCGGC
CTGACCCTGA TGAACCGCTA CATCCACGGC TACAACGTGC ACAACGCCAG CACCCAGGGC
CGCGAAAGCG AGCTGGCCTA TGTGGTCCAG TCCGGGCCGT TCAAGGCCCT GAACCTCAAG
TGGCGCAACT CCAGCCAGCG CCGGGACTGG GGCAGCACCA ACAGTTTCGA TGAGAACAGG
CTGATCGTCA GCTACCCGCT GAGCCTACTT TAA
 
Protein sequence
MKCRTLYPLV PTFALAASLP LQALAEGFVD DAKASLTLRN FYMNRDYTGT ASQGKAEEWT 
QSFIFDFKSG YTPGVVGFGV DVLGLYSIKL DGGKGTAGTQ LLPVHDDGRP ADDFGRTALA
GKMRVSRTEL KVGEWSPTLP ILRADDGRSL PQTLQGAQVT SNELAGLSLY GGQFRQNSPR
NDASMQDMSL FTRTAFTSDR FNFAGGEYRF NQERTLVGAW YAQLEDIYQQ RYFQVQHQQP
LGNWVLGANL GYFWGKDDGG AKAGELNNRT ASGLFSAKLG GNTFYVGLQK VMGDDEWFRV
NGASGGTLAN DAFGSSYESA RERSWQVRHD FNFVVLGIPG LTLMNRYIHG YNVHNASTQG
RESELAYVVQ SGPFKALNLK WRNSSQRRDW GSTNSFDENR LIVSYPLSLL