| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2505 |
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| Symbol | |
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| ID | 1045733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2852291 |
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| End bp | 2853328 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637145931 |
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| Product | GAF domain/GGDEF domain-containing protein |
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| Protein accession | NP_744653 |
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| Protein GI | 26989228 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.430442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCTT GTCCCCTACC CGCTGATGAA GCACTTCGTC AGCGCACACT TGATGATATG
GACTTGGTCG ATACGCCGGC CGAGCATTAT CTTGATACCT TGGTACGACT CACCCAAGAA
CTAGCCCAGG TGGAGACCGT TCTGATCAGC CTAATCGATC AGGATCGGCA GTGGTTCAAG
GCTCGAATCG GTATCGAGGT AAGCGAGACG AAGCGCAATG TGTCCTTTTG CGGCTACGCG
ATTCTCGGTG AAGATACCTT GATGGTTTCC GACGCCAGGT GCGATTCACG CTTCGAGGAC
AATCCCCTCG TGCTGAACCC ACCCTATATC CGGTTCTATG CGGGCCACCC GTTACGTGCC
TCAAATGGCA AAGCCATTGG CACCCTGTGC ATGTTCGATC CTCGGCCGCG GAAGCTCAGC
GACGCGCAAC AGGCTAATTT TCGGGACTTA GCCACGCTCA CCGAGGGTTA TTTGCAACTG
CGGAGCCTAG CTCAGGTCAA TCACGCTCTG CGTGTTGAAA TGGATCGCGG GCAGCGCAGG
GCTTTGCTTG ATCCTTTGAC ACAACTATGG AACCGCGGGG CGTTGGCAGC ATTTCAGAAC
CGAGAACTTC GTTTGGCTGA GGAGCGAGGT TTACAGCTAG GTGCCGTCTA CGCAGACCTC
GACCGTTTCA AATCGGTCAA TGACGAGCAT GGCCACGATG CCGGCGATAA AGTGCTCTGC
GAGTGCGCCC GCCGCCTGCG GGCTACGCTG CGGCCAGATG ACCTGCTGGT ACGCCAGGGA
GGAGAGGAAT TCGTAGCCTT GCTACGGGTT AAAGATAGCC AAGAATTGGC GCAGATTGCG
GAGCGCTTGC GTCAGTCAAT CGGCAGCGCG CCGTTTCTGT TACCCGGCGG CCCTCGGAAG
ATGACCATGA GCATTGGGTG CGCCCTGCTC ACCCAGGGTG AGCAGATTGA TGATGCAATA
AAGCGCGCTG ACGGCGGTCT CTATGCGGCC AAACATGGTG GACGTGACCA AGTTGTCTAT
GTGCCAGCGT TATCCTGA
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| Protein sequence | MPACPLPADE ALRQRTLDDM DLVDTPAEHY LDTLVRLTQE LAQVETVLIS LIDQDRQWFK
ARIGIEVSET KRNVSFCGYA ILGEDTLMVS DARCDSRFED NPLVLNPPYI RFYAGHPLRA
SNGKAIGTLC MFDPRPRKLS DAQQANFRDL ATLTEGYLQL RSLAQVNHAL RVEMDRGQRR
ALLDPLTQLW NRGALAAFQN RELRLAEERG LQLGAVYADL DRFKSVNDEH GHDAGDKVLC
ECARRLRATL RPDDLLVRQG GEEFVALLRV KDSQELAQIA ERLRQSIGSA PFLLPGGPRK
MTMSIGCALL TQGEQIDDAI KRADGGLYAA KHGGRDQVVY VPALS
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