| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2501 |
|---|
| Symbol | |
|---|
| ID | 1045727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2847234 |
|---|
| End bp | 2848643 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637145927 |
|---|
| Product | phage integrase, putative |
|---|
| Protein accession | NP_744649 |
|---|
| Protein GI | 26989224 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAAGG TAACGATCAA GCAATTGGAG GCACTGACAG CGCAAGATGA CGGCAAGGTC
TTCCGTGAGG ATGGAGGACT GGTTGCTGAG GTGCGTGTCG GAGTCCGCGG GATCACAGTT
CAGTTCAGCT ATGAATTCAA GCTGGATGGA GCGCGAACTA GGAAGCGCTT GGGTAGTTGG
CCGAAGAAAA GCTTGGCGCA AATTCGGTCT GAGCGGGACG AAGCCCGCGT ACTCGTCACC
AAAGGCCTGC ACCCTACCCT TGCCGCCAAA GCTGCACGGA TCGAGGCGCA AGCGGCAATC
GCCACCACTA TTGCTGAAGC AGAGCGTGAA GCCGCAGAAA ACAAGACAGT GTCCGATCTC
TTTGATGAGT GGATACGTGA CGGCGTCTCC CGCCAGGACG GCAATGCCGA GCTGATCCGC
AGCTTCAAGA AGGACGTACT GCCACTCATT GGCAAGAAGC CGCTGCGCAA TCTTACTGAA
AAGGATCTGC TCGCTGTCCT GCGCTCAGTC AAATCACGCG GCCTAAACCG CACCGTCGTT
ATCCGCAGCA AGGACATCGG CCAGATGCTG CGCTGGGCCG AGAAACGTAA ACCATGGCGC
GGCCTCATGA CTGACGGCAA TCCAGCCGAC CTGATAGACG TGAACAAGTT GCTCGACCAT
GACTACGAAG AGCAGCGGGA TCGTCTGCTC TCGCCTGACG AGATTCGTGA GCTGCGTGAC
GTCCTGGAAC GCCTGGAAAA TGACTACGAT GAGCTTCCTG CGGGCCAGAA GTATTCAGGC
ATTCGCCCGG TCAACACTCG AGTCCAGTGC GCTCTGTGGA TCTGCCTGAG CACCCTCTGT
CGTATCGGTG AGTTGCTCAA GGCCGAGTGG CGGTACGTGG ACTTGGAGAA AGGCACCTGG
TTCATCCCTG CCGAGGCCAC CAAGGGCCAT AAAGGCAAGC GCCAGGATCA CCACGTGTTC
CTGTCAGCGT TTTCCATTGC GCAGTTCAAA CGCCTTCAGG AAGAAACCGG CGATACGCCG
TTCTGCTTCC CCAGCAAGGA TGGTCGAAGC CACGTTGATA CCAAGACTGT CAGCAAGCTC
ATCGGAGACC GCCAGTGTCG ATTCAAGAAC CGCAGCAAGC CACTGGCCGG CCGGCATCAT
GACGACTCAC TGGTACTGAG CAAGGGAACC AAGGGTGAAT GGACCCCGCA TGACCTGCGC
CGCACGGGCG CGACGATGAT GCAGGAGCTG GGTGTAACAC TGGAAATAAT CGACCGCTGC
CAGAACCATC TGCTGGGCGG CTCGAAGGTA CGCCGACATT ACCTGCACCA CGATTACGCC
AAGGAAAAAA CCGAAGCCTG GCGCTTGTTG GGCGAGAAGC TGGAGTCGAT TCTTGCCGGG
AGCCCGGTAG CTGCTGTCCA GTCTCAGTAG
|
|---|
| Protein sequence | MSKVTIKQLE ALTAQDDGKV FREDGGLVAE VRVGVRGITV QFSYEFKLDG ARTRKRLGSW
PKKSLAQIRS ERDEARVLVT KGLHPTLAAK AARIEAQAAI ATTIAEAERE AAENKTVSDL
FDEWIRDGVS RQDGNAELIR SFKKDVLPLI GKKPLRNLTE KDLLAVLRSV KSRGLNRTVV
IRSKDIGQML RWAEKRKPWR GLMTDGNPAD LIDVNKLLDH DYEEQRDRLL SPDEIRELRD
VLERLENDYD ELPAGQKYSG IRPVNTRVQC ALWICLSTLC RIGELLKAEW RYVDLEKGTW
FIPAEATKGH KGKRQDHHVF LSAFSIAQFK RLQEETGDTP FCFPSKDGRS HVDTKTVSKL
IGDRQCRFKN RSKPLAGRHH DDSLVLSKGT KGEWTPHDLR RTGATMMQEL GVTLEIIDRC
QNHLLGGSKV RRHYLHHDYA KEKTEAWRLL GEKLESILAG SPVAAVQSQ
|
|---|
| |