| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2475 |
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| Symbol | |
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| ID | 1045644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2821719 |
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| End bp | 2822312 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637145901 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | NP_744623 |
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| Protein GI | 26989198 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000212819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTAC GTTACGACGA TACGCGTCAG CATCTACTCG ATACCGGCCA CCGCATGATG
GTGGTTAAGG GCTTCACTGG TGTGGGCCTT AACGAGATTT TGCAGGCCGC TAACGTGCCG
AAAGGCTCGT TTTACCATTA TTTTAAGTCC AAAGAGCAGT ACGGCCAGTC GTTGCTTGAG
GATTACTTTC GCAATTATTT GGCGAGCATG GATGAGCGTT TTGCCGTCAC GGGCAACACG
GCTCGCGAGC GCCTGATGGG GTATTGGCAG AAGTGGCTAG ACAGCTACTG CGAGCCCTGC
GACGACCAGA AGTGCCTGGT GGTGAAGCTG AGCGCAGAGG TAGCTGATCT TTCGGAGCCC
ATGCGCCTCA CGCTGCGCGA TGGTGCAGAT CAAATCATTG CGCGGATTTC TGAATGTATT
GAGCAGGGGC AGCGAGACGG TTCTCTGGCA ATGGGCGATG CTTTCCACAC TGCGACGGCC
CTTTACCAGT TGTGGCTCGG TGCGAGTCTG CTGAGCAAGC TACACCGTAA TAGTCGGCCG
CTGGAAAACG CCATGGCCAC AACTCAGACC ATTCTGACCT CTGACAACAT CTGA
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| Protein sequence | MKLRYDDTRQ HLLDTGHRMM VVKGFTGVGL NEILQAANVP KGSFYHYFKS KEQYGQSLLE
DYFRNYLASM DERFAVTGNT ARERLMGYWQ KWLDSYCEPC DDQKCLVVKL SAEVADLSEP
MRLTLRDGAD QIIARISECI EQGQRDGSLA MGDAFHTATA LYQLWLGASL LSKLHRNSRP
LENAMATTQT ILTSDNI
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