Gene PP_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2470 
SymbolpheT 
ID1045639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2813861 
End bp2816242 
Gene Length2382 bp 
Protein Length793 aa 
Translation table11 
GC content64% 
IMG OID637145895 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionNP_744618 
Protein GI26989193 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.24212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA GTGAACAGTG GCTGCGCGGT TGGGTCAACC CGCAAGTCTC CCGTGACGAA 
CTGGTCGCCC GCCTGTCCAT GGCCGGCCTC GAAGTTGACA GTGTTACCCC CGCTGCCGGC
CAGTTCAGCG GCATCGTCGT GGGCGAAATT CTCGCCACCG AACAACACCC GGACGCCGAC
AAGCTGCGCG TGTGCCAGGT AAGCAGCGGC CAGGAAACCT TCCAGGTTGT GTGCGGCGCC
CCTAACGCCC GCCCAGGCAT CAAGATCCCG TTCGCCATGA TCGGTGCCGA ACTGCCAGGC
GACTTCAAGA TCAAGAAGGC CAAGCTGCGC GGTGTCGAGT CCTTCGGCAT GCTGTGCTCG
GCTGCCGAGC TGCAGATCAG CGAAGAAAAC GACGGCCTGC TGGAGCTGGC TGCCGACGCT
CCGGTTGGCG AAGACATTCG CACGTACCTG AGCCTGGATG ATGCCAGCAT CGAAATCGGC
CTGACCCCGA ACCGCGGCGA CTGCCTGTCC ATCGCCGGCC TGGCCCGCGA CGTCAGCGCC
CTGTACGACA CCCCGGTCAC CCGCCCGGTG GTGCCAGCCG TAGCGGCCGC CCATGACGAA
GTGCGCCCGG TCGAAGTCAG CGCCCCGGCT GCCTGCCCGC GCTACCTGGG CCGCGTTATC
CGTAACGTCG ACCTGAGCAA GCCAACCCCA CTGTGGATGG TCGAGCGCCT GCGCCGCAGC
GACGTTCGCA GCATCGACGC CGCCGTCGAC ATCACCAACT ACGTGATGCT CGAACTCGGC
CAGCCGATGC ACGCCTTCGA CCTGGCAGAA ATCAACGGCG GCATCCGCGT GCGCATGGCC
GAAGAGGGCG AAAAGCTCGT CCTGCTCGAC GGCCAGGAAG TGGCCCTGCG CGCCGACACC
CTGGTCATCG CCGACCACAC CCGCGCCTTG GCCATCGCCG GCGTCATGGG TGGCGAGCAC
AGTGGTGTGA ACACCGAAAA AACCCGCGAC CTGTTCCTGG AAAGCGCCTT CTTCGAGCCG
ATTTCCGTCG CCGGTAAAGC CCGTTCCTAC GGCCTGCACA CCGATGCATC GCACCGCTAC
GAGCGCGGCG TCGACTCGCA ACTGGCCCGC GAAGCCATGG AGCGCGCCAC CCAGTTGCTG
CTGGACATCG TTGGCGGCGA AGCCGGCCCT GTGGTCGAAG CGGTCAGCGA ACAGCACCTG
CCACAAGTAG CCCCGGTCAC CCTGCGCGCC GAACGCATCA CCCAGATGCT TGGCATGGAA
ATGGACCCAG CCCAGGTCGA GCAGTTGCTC AACGCCCTCG AGCTGACCAC GACCAAGAGC
GGGGAAGGGC AGTGGACCGT CAGCGTACCA AGCCACCGCT TCGACATCAG CCTGGAAGTG
GACCTGATCG AAGAGCTGGC CCGCCTGTAC GGCTACAACA ACCTGCCGGT TCGTTACCCG
CAAGCCCGCC TGGCCCCACA GGGCAAGCCA GAAACCCGCG GTGACCTGCC GACCCTGCGC
CGCCTGCTGG TTGCCCGCGG CTACCAGGAA GCCATCACCT ACAGCTTCAT CGACCCGAAA
CTGTTCGAAC TGTTCAGCCC GGGCGTAGAG CCGCTGCTGC TGGCCAACCC CATCTCCAGC
GACATGGCCG CCATGCGCGC CTCGCTGTGG CCGGGCCTGG TCAAGGCTCT GCAGCACAAC
CTGAACCGCC AGCAAGACCG CGTGCGCCTG TTCGAAAGCG GCCTGCGTTT TGTCGGCCAA
CTGGGTGATC TGCAGCAGCA GCCAATGATT GCCGGCGTCA TCACCGGCAG CCGCCTGCCA
GAAGGCTGGG CCAACGGCCG CGACGGCGTC GACTTCTTCG ACGTGAAAGC CGACGTGGAA
GCCCTGCTGG GTTACTCCGG CGCCCTGAGC GACTTCACCT TCAGCGCCGG CAAACACCCA
GCCCTGCACC CAGGCCAGAC CGCTGTCATC GAGCGTGACG GCAAGCTGGT CGGCTACCTC
GGCGCCATCC ACCCGGAGCT GGCCAAAGCC CTGGGCCTGG ACCGCCCGGT GTTCCTGTTC
GAGCTGGTGC TGGGCGACGT GGTCGAAGGC CGCCTGCCGA AATTCAGCGA ACTGTCCAAG
TTCCCGGAAA CCCGTCGCGA CCTGGCTTTG ATCGCAGGAC GTGATGTAGC TTCTAGCGCG
GTGCTTGAAT TAATTCGTGA CAATGCAGGC GAATGGCTCA CAGACCTCAG GCTGTTTGAT
GTGTACCAAG GTAAAGGCAT TGATCCTGAT AGAAAAAGCC TTGCCGTCGG CTTGACCTGG
CAGCATCCAT CGCGCACTCT TAACGACGAT GAGGTGAACA CTACCCTGCA AAACATCCTC
ACCTCGCTCG AACAAAGGTT GAACACCACG TTAAGGAAAT AA
 
Protein sequence
MKFSEQWLRG WVNPQVSRDE LVARLSMAGL EVDSVTPAAG QFSGIVVGEI LATEQHPDAD 
KLRVCQVSSG QETFQVVCGA PNARPGIKIP FAMIGAELPG DFKIKKAKLR GVESFGMLCS
AAELQISEEN DGLLELAADA PVGEDIRTYL SLDDASIEIG LTPNRGDCLS IAGLARDVSA
LYDTPVTRPV VPAVAAAHDE VRPVEVSAPA ACPRYLGRVI RNVDLSKPTP LWMVERLRRS
DVRSIDAAVD ITNYVMLELG QPMHAFDLAE INGGIRVRMA EEGEKLVLLD GQEVALRADT
LVIADHTRAL AIAGVMGGEH SGVNTEKTRD LFLESAFFEP ISVAGKARSY GLHTDASHRY
ERGVDSQLAR EAMERATQLL LDIVGGEAGP VVEAVSEQHL PQVAPVTLRA ERITQMLGME
MDPAQVEQLL NALELTTTKS GEGQWTVSVP SHRFDISLEV DLIEELARLY GYNNLPVRYP
QARLAPQGKP ETRGDLPTLR RLLVARGYQE AITYSFIDPK LFELFSPGVE PLLLANPISS
DMAAMRASLW PGLVKALQHN LNRQQDRVRL FESGLRFVGQ LGDLQQQPMI AGVITGSRLP
EGWANGRDGV DFFDVKADVE ALLGYSGALS DFTFSAGKHP ALHPGQTAVI ERDGKLVGYL
GAIHPELAKA LGLDRPVFLF ELVLGDVVEG RLPKFSELSK FPETRRDLAL IAGRDVASSA
VLELIRDNAG EWLTDLRLFD VYQGKGIDPD RKSLAVGLTW QHPSRTLNDD EVNTTLQNIL
TSLEQRLNTT LRK