| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2466 |
|---|
| Symbol | infC |
|---|
| ID | 1045635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2811531 |
|---|
| End bp | 2812064 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637145891 |
|---|
| Product | translation initiation factor IF-3 |
|---|
| Protein accession | NP_744614 |
|---|
| Protein GI | 26989189 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
|---|
| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00240261 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAACG ATAAGCGTGC TGTACCGAAG GCCCCGATCA ACGAGAATAT CTCGGCCCGC
GAGGTTCGGT TAATTGGCGC AGACGGCGAG CAGGTTGGCA TCGTCTCGAT TGATGAAGCG
CTGCGTATCG CTGATGAAGC GAAGCTGGAC CTGGTAGAAA TCTCTGCAGA CGCGGTACCA
CCCGTCTGCA AGGTCATGGA CTACGGTAAG CACCTCTTCG AGAAGAAGAA GCAGGCTAAC
GAAGCCAAGA AAAACCAGAA ACAGATCCAG ATCAAAGAAA TCAAGTTTCG TCCAGGGACG
GAGGATGGGG ATTACCAGGT AAAACTACGC AACCTGGTAC GTTTCCTTAC CGATGGGGAC
AAGGCCAAGA TCTCTCTGAG ATTCCGTGGT CGTGAGATGG CCCACCAGGA GCTGGGCATG
GAGCTGTTGA AGCGGGTCGA AGCCGACCTC GCCGAATACG GCACCGTTGA GCAGCATCCG
AAGATGGAAG GACGCCAGCT TATGATGGTC ATCGCCCCCA AGAAAAAGAA GTAA
|
|---|
| Protein sequence | MRNDKRAVPK APINENISAR EVRLIGADGE QVGIVSIDEA LRIADEAKLD LVEISADAVP
PVCKVMDYGK HLFEKKKQAN EAKKNQKQIQ IKEIKFRPGT EDGDYQVKLR NLVRFLTDGD
KAKISLRFRG REMAHQELGM ELLKRVEADL AEYGTVEQHP KMEGRQLMMV IAPKKKK
|
|---|
| |