Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2465 |
Symbol | thrS |
ID | 1045634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2809591 |
End bp | 2811513 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637145890 |
Product | threonyl-tRNA synthetase |
Protein accession | NP_744613 |
Protein GI | 26989188 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0717195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTTA TTACTCTTCC CGATGGCAGT CAACGTTCGT TCGATCACGC CGTATCCGTA GCCGAAGTAG CCGCTTCCAT CGGCGCTGGC CTGGCCAAGG CCACCGTTGC CGGCAAGGTC GACGGCAAGC TGGTCGATGC GTGTGACCTG ATCAGCAACG ACGCCACCCT GCAGATCATC ACCCCTAAAG ATGAAGAGGG ACTGGAGATC ATTCGTCACT CGTGCGCCCA CTTGGTTGGC CACGCCGTGA AGCAGCTGTA CCCGACCGCC AAGATGGTGA TCGGCCCGGT CATTGACGAA GGCTTCTATT ACGACATCGC CTACGAGCGC CCCTTCACCC CAGAAGACAT GGCCGCCATC GAAAAGCGCA TGATGGAGCT GATTGAAAAA GACTACGACG TGGTCAAGAA AATGACCCCG CGCGCCGAAG TCATCGATGT GTTCAAGGCC CGTGGCGAAG ACTACAAGCT GCGTCTGGTC GAAGACATGC CGGATGAACA GGCCATGGGC CTGTACTACC ACGAAGAATA CGTCGACATG TGCCGTGGCC CGCACGTGCC GAACACCCGC TTCCTCAAGG CATTCAAGCT GACCAAGCTG TCCGGCGCCT ACTGGCGTGG CGATGCCAAG AACGAGCAGC TTCAGCGCGT GTACGGCACG GCCTGGGCTG ACAAGAAGCA GCTGGCTGCG TACATCCAGC GCATCGAAGA AGCCGAAAAA CGCGACCACC GCAAGATCGG CAAGCAGCTC GACCTGTTCC ACCTGCAGGA AGAAGCCCCG GGCATGGTGT TCTGGCACGC CAACGGCTGG ACCGTCTACC AGGTACTCGA GCAGTACATG CGTGGCGTGC AGCGCGAAAA CGGCTACCAG GAAATCAAGA CCCCGCAGGT TGTCGACCGC ATCCTGTGGG AGCGTTCCGG CCACTGGTCC AACTATGCCG AAAACATGTT CACCACTTCG TCGGAAAGCC GTGACTACGC GGTAAAACCG ATGAACTGCC CGTGCCACGT GCAGGTGTTC AACCAGGGCC TGAAAAGCTA CCGCGACCTG CCGCTGCGTC TCGCCGAGTT CGGTGCCTGC CACCGTAACG AGCCGTCCGG CGCCCTGCAC GGCATCATGC GCGTGCGTGG CTTCGTACAG GACGATGCGC ACATTTTCTG CACCGAAGAT CAGGTGAAGA AAGAGGCCGC CGACTTCATC AAGCTGACCC TGGACGTGTA CAAGGACTTC GGTTTCAGCG ACATCGCCAT GAAACTGTCC ACTCGTCCGG CCAAGCGTGT CGGTTCCGAA GAGCTGTGGG ATCGTGCTGA AACAGCGCTG GCCGACGCCC TGAACGAATC CGGCCTTGAG TGGGAATACC AGCCGGGCGA GGGTGCCTTC TACGGCCCGA AAATCGAGTT TACCCTGCGC GACTGCCTCG GCCGTAACTG GCAGTGCGGT ACCCTGCAGT ACGACCCGAA CCTGCCAGAG CGTCTGGATG CCAGCTATAT CGCCGAAGAT AACAGCCGAG TTCGCCCGGT CATGCTGCAC CGCGCCATCC TCGGTTCGTT CGAGCGCTTC ATCGGCATGC TGATCGAGCA CTACGCGGGC GTGTTCCCGG CGTGGCTGGC CCCAACTCAG GCGGTGATCA TGAATATCAC CGACAAGCAG GCCGATTTCG CCCTCGAGGT TGAGAAATCT CTGAACGGAA GCGGTTTCCG TGCCAAGTCG GACTTGAGAA ATGAGAAGAT CGGCTTTAAA ATCCGCGAGC ATACTTTGCT CAAGGTCCCG TACCTTTTGG TTATAGGGGA CCGCGAAGTC GAAACGCAAA CCGTCGCTGT GCGTACTCGC GAAGGCGCAG ACCTGGGCTC CATGCCCGTC GCCCAATTCG TTGAGTTGCT GACACAAGCG GTTTCCCGGC GTGGTCGCCA AGAATCGGAG TAA
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Protein sequence | MPVITLPDGS QRSFDHAVSV AEVAASIGAG LAKATVAGKV DGKLVDACDL ISNDATLQII TPKDEEGLEI IRHSCAHLVG HAVKQLYPTA KMVIGPVIDE GFYYDIAYER PFTPEDMAAI EKRMMELIEK DYDVVKKMTP RAEVIDVFKA RGEDYKLRLV EDMPDEQAMG LYYHEEYVDM CRGPHVPNTR FLKAFKLTKL SGAYWRGDAK NEQLQRVYGT AWADKKQLAA YIQRIEEAEK RDHRKIGKQL DLFHLQEEAP GMVFWHANGW TVYQVLEQYM RGVQRENGYQ EIKTPQVVDR ILWERSGHWS NYAENMFTTS SESRDYAVKP MNCPCHVQVF NQGLKSYRDL PLRLAEFGAC HRNEPSGALH GIMRVRGFVQ DDAHIFCTED QVKKEAADFI KLTLDVYKDF GFSDIAMKLS TRPAKRVGSE ELWDRAETAL ADALNESGLE WEYQPGEGAF YGPKIEFTLR DCLGRNWQCG TLQYDPNLPE RLDASYIAED NSRVRPVMLH RAILGSFERF IGMLIEHYAG VFPAWLAPTQ AVIMNITDKQ ADFALEVEKS LNGSGFRAKS DLRNEKIGFK IREHTLLKVP YLLVIGDREV ETQTVAVRTR EGADLGSMPV AQFVELLTQA VSRRGRQESE
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