Gene PP_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2465 
SymbolthrS 
ID1045634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2809591 
End bp2811513 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content59% 
IMG OID637145890 
Productthreonyl-tRNA synthetase 
Protein accessionNP_744613 
Protein GI26989188 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0717195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTA TTACTCTTCC CGATGGCAGT CAACGTTCGT TCGATCACGC CGTATCCGTA 
GCCGAAGTAG CCGCTTCCAT CGGCGCTGGC CTGGCCAAGG CCACCGTTGC CGGCAAGGTC
GACGGCAAGC TGGTCGATGC GTGTGACCTG ATCAGCAACG ACGCCACCCT GCAGATCATC
ACCCCTAAAG ATGAAGAGGG ACTGGAGATC ATTCGTCACT CGTGCGCCCA CTTGGTTGGC
CACGCCGTGA AGCAGCTGTA CCCGACCGCC AAGATGGTGA TCGGCCCGGT CATTGACGAA
GGCTTCTATT ACGACATCGC CTACGAGCGC CCCTTCACCC CAGAAGACAT GGCCGCCATC
GAAAAGCGCA TGATGGAGCT GATTGAAAAA GACTACGACG TGGTCAAGAA AATGACCCCG
CGCGCCGAAG TCATCGATGT GTTCAAGGCC CGTGGCGAAG ACTACAAGCT GCGTCTGGTC
GAAGACATGC CGGATGAACA GGCCATGGGC CTGTACTACC ACGAAGAATA CGTCGACATG
TGCCGTGGCC CGCACGTGCC GAACACCCGC TTCCTCAAGG CATTCAAGCT GACCAAGCTG
TCCGGCGCCT ACTGGCGTGG CGATGCCAAG AACGAGCAGC TTCAGCGCGT GTACGGCACG
GCCTGGGCTG ACAAGAAGCA GCTGGCTGCG TACATCCAGC GCATCGAAGA AGCCGAAAAA
CGCGACCACC GCAAGATCGG CAAGCAGCTC GACCTGTTCC ACCTGCAGGA AGAAGCCCCG
GGCATGGTGT TCTGGCACGC CAACGGCTGG ACCGTCTACC AGGTACTCGA GCAGTACATG
CGTGGCGTGC AGCGCGAAAA CGGCTACCAG GAAATCAAGA CCCCGCAGGT TGTCGACCGC
ATCCTGTGGG AGCGTTCCGG CCACTGGTCC AACTATGCCG AAAACATGTT CACCACTTCG
TCGGAAAGCC GTGACTACGC GGTAAAACCG ATGAACTGCC CGTGCCACGT GCAGGTGTTC
AACCAGGGCC TGAAAAGCTA CCGCGACCTG CCGCTGCGTC TCGCCGAGTT CGGTGCCTGC
CACCGTAACG AGCCGTCCGG CGCCCTGCAC GGCATCATGC GCGTGCGTGG CTTCGTACAG
GACGATGCGC ACATTTTCTG CACCGAAGAT CAGGTGAAGA AAGAGGCCGC CGACTTCATC
AAGCTGACCC TGGACGTGTA CAAGGACTTC GGTTTCAGCG ACATCGCCAT GAAACTGTCC
ACTCGTCCGG CCAAGCGTGT CGGTTCCGAA GAGCTGTGGG ATCGTGCTGA AACAGCGCTG
GCCGACGCCC TGAACGAATC CGGCCTTGAG TGGGAATACC AGCCGGGCGA GGGTGCCTTC
TACGGCCCGA AAATCGAGTT TACCCTGCGC GACTGCCTCG GCCGTAACTG GCAGTGCGGT
ACCCTGCAGT ACGACCCGAA CCTGCCAGAG CGTCTGGATG CCAGCTATAT CGCCGAAGAT
AACAGCCGAG TTCGCCCGGT CATGCTGCAC CGCGCCATCC TCGGTTCGTT CGAGCGCTTC
ATCGGCATGC TGATCGAGCA CTACGCGGGC GTGTTCCCGG CGTGGCTGGC CCCAACTCAG
GCGGTGATCA TGAATATCAC CGACAAGCAG GCCGATTTCG CCCTCGAGGT TGAGAAATCT
CTGAACGGAA GCGGTTTCCG TGCCAAGTCG GACTTGAGAA ATGAGAAGAT CGGCTTTAAA
ATCCGCGAGC ATACTTTGCT CAAGGTCCCG TACCTTTTGG TTATAGGGGA CCGCGAAGTC
GAAACGCAAA CCGTCGCTGT GCGTACTCGC GAAGGCGCAG ACCTGGGCTC CATGCCCGTC
GCCCAATTCG TTGAGTTGCT GACACAAGCG GTTTCCCGGC GTGGTCGCCA AGAATCGGAG
TAA
 
Protein sequence
MPVITLPDGS QRSFDHAVSV AEVAASIGAG LAKATVAGKV DGKLVDACDL ISNDATLQII 
TPKDEEGLEI IRHSCAHLVG HAVKQLYPTA KMVIGPVIDE GFYYDIAYER PFTPEDMAAI
EKRMMELIEK DYDVVKKMTP RAEVIDVFKA RGEDYKLRLV EDMPDEQAMG LYYHEEYVDM
CRGPHVPNTR FLKAFKLTKL SGAYWRGDAK NEQLQRVYGT AWADKKQLAA YIQRIEEAEK
RDHRKIGKQL DLFHLQEEAP GMVFWHANGW TVYQVLEQYM RGVQRENGYQ EIKTPQVVDR
ILWERSGHWS NYAENMFTTS SESRDYAVKP MNCPCHVQVF NQGLKSYRDL PLRLAEFGAC
HRNEPSGALH GIMRVRGFVQ DDAHIFCTED QVKKEAADFI KLTLDVYKDF GFSDIAMKLS
TRPAKRVGSE ELWDRAETAL ADALNESGLE WEYQPGEGAF YGPKIEFTLR DCLGRNWQCG
TLQYDPNLPE RLDASYIAED NSRVRPVMLH RAILGSFERF IGMLIEHYAG VFPAWLAPTQ
AVIMNITDKQ ADFALEVEKS LNGSGFRAKS DLRNEKIGFK IREHTLLKVP YLLVIGDREV
ETQTVAVRTR EGADLGSMPV AQFVELLTQA VSRRGRQESE