Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2463 |
Symbol | cspA-2 |
ID | 1045632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2808572 |
End bp | 2808784 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637145888 |
Product | cold shock protein CspA |
Protein accession | NP_744611 |
Protein GI | 26989186 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.222592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAATC GCCAACAAGG CACCGTCAAA TGGTTCAATG ATGAGAAAGG CTACGGCTTC ATCACCCCAG CAGGCGGCGG CGACGACCTG TTCGTACACT TCAAAGCCAT CGAATCTGAC GGCTTCAAGA GCCTGAAAGA AGGCCAGACT GTTTCCTTCG TCGCCGAGCG CGGCCAGAAG GGCATGCAGG CTGCACAGGT TCGTCCGGAG TAA
|
Protein sequence | MSNRQQGTVK WFNDEKGYGF ITPAGGGDDL FVHFKAIESD GFKSLKEGQT VSFVAERGQK GMQAAQVRPE
|
| |