Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2448 |
Symbol | |
ID | 1045617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2795001 |
End bp | 2796284 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145871 |
Product | FAD dependent oxidoreductase |
Protein accession | NP_744596 |
Protein GI | 26989171 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAACA CCCCCTACCC CCAGTCCTAC TACGCCGCCT CGGCCAACCC GGTGCCGCCA CGTCCGGCGC TGCAGGGTGA GGTGGAAACC GATGTGTGCA TCATCGGTGC CGGCTACACC GGCCTGTCCA GCGCCCTGTT CCTTCTGGAG AACGGCTTCA AGGTGAGCAT CGTCGAAGCG GCCAAGGTCG GCTTCGGCGC ATCGGGCCGC AACGGCGGCC AGATCGTCAA CAGCTACAGC CGCGACATTG ATGTCATCGA ACGCACCGTC GGCCCCAAGC AGGCACAACT GCTGGGCCAC ATGGCCTTCG AGGGCGGGCG CATCATTCGT GAACGCGTGG CCAAGTACAA CATTCAGTGC GACCTGAAAG ATGGTGGCGT ATTCGCTGCC CTTACCAGCA AGCAGATGGG CCATCTGGAA TCGCAAAAGC GCCTGTGGGA ACGCTTTGGC CATAATCAGC TGGAGCTGAT GGACCAGAAG CGCATCCGCG AAGTGGTTGC CTGCGACAGC TACATCGGCG GCATGCTCGA CATGAGCGGC GGCCACATCC ACCCGCTGAA CCTGGCCCTG GGTGAAGCTG CCGCGGTCGA GTCGCTGGGT GGCATCATCT ATGAGCAAAC CCCGGCCGTG CGCATCGAAC GCGGTGCCAA CCCGGTCGTG CATACCCCGC AGGGCAAGGT CCGCGCCAAG TTCATCATCG TTGCCGGCAA CGCCTACCTG GGCAACCTGG TACCCGAGCT GGCCGCCAAG TCCATGCCAT GCGGCACGCA GGTGATCACC ACCGAGCCAC TGGGCGAAGA ACTGGCACGC ACCCTGCTGC CGCAGGACTA CTGCGTCGAG GACTGCAACT ACCTGCTCGA CTACTACCGC CTGACCAGCG ACAAGCGCCT GATTTTCGGT GGCGGCGTGG TGTACGGCGC GCGTGACCCG GCCAACATCG AGGCGATCAT CCGCCCGAAA ATGCTCAAGG CCTTCCCGCA GCTGAAGAAC GTGAAGATCG ACTACGCCTG GACCGGTAAC TTCCTGCTGA CCTTGTCGCG CCTGCCACAG GTTGGCCGGA TTGGCGACAA CATCTACTAC TCGCAGGGTT GCTCGGGCCA CGGCGTGACC TATACCCACC TGGCGGGCAA GGTGCTGGCC GAGGCCCTGC GCGGCCAGGC AGAGCGTTTC GACGCCTTTG CCGGCCTGCC GCACTACCCG TTCCCGGGTG GCCAGATGCT GCGCGTACCC TTCAGCGCCA TCGGTGCCTG GTACTACAGC CTGCGCGATC GCCTGGGCTT CTGA
|
Protein sequence | MANTPYPQSY YAASANPVPP RPALQGEVET DVCIIGAGYT GLSSALFLLE NGFKVSIVEA AKVGFGASGR NGGQIVNSYS RDIDVIERTV GPKQAQLLGH MAFEGGRIIR ERVAKYNIQC DLKDGGVFAA LTSKQMGHLE SQKRLWERFG HNQLELMDQK RIREVVACDS YIGGMLDMSG GHIHPLNLAL GEAAAVESLG GIIYEQTPAV RIERGANPVV HTPQGKVRAK FIIVAGNAYL GNLVPELAAK SMPCGTQVIT TEPLGEELAR TLLPQDYCVE DCNYLLDYYR LTSDKRLIFG GGVVYGARDP ANIEAIIRPK MLKAFPQLKN VKIDYAWTGN FLLTLSRLPQ VGRIGDNIYY SQGCSGHGVT YTHLAGKVLA EALRGQAERF DAFAGLPHYP FPGGQMLRVP FSAIGAWYYS LRDRLGF
|
| |