Gene PP_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2448 
Symbol 
ID1045617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2795001 
End bp2796284 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content64% 
IMG OID637145871 
ProductFAD dependent oxidoreductase 
Protein accessionNP_744596 
Protein GI26989171 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACA CCCCCTACCC CCAGTCCTAC TACGCCGCCT CGGCCAACCC GGTGCCGCCA 
CGTCCGGCGC TGCAGGGTGA GGTGGAAACC GATGTGTGCA TCATCGGTGC CGGCTACACC
GGCCTGTCCA GCGCCCTGTT CCTTCTGGAG AACGGCTTCA AGGTGAGCAT CGTCGAAGCG
GCCAAGGTCG GCTTCGGCGC ATCGGGCCGC AACGGCGGCC AGATCGTCAA CAGCTACAGC
CGCGACATTG ATGTCATCGA ACGCACCGTC GGCCCCAAGC AGGCACAACT GCTGGGCCAC
ATGGCCTTCG AGGGCGGGCG CATCATTCGT GAACGCGTGG CCAAGTACAA CATTCAGTGC
GACCTGAAAG ATGGTGGCGT ATTCGCTGCC CTTACCAGCA AGCAGATGGG CCATCTGGAA
TCGCAAAAGC GCCTGTGGGA ACGCTTTGGC CATAATCAGC TGGAGCTGAT GGACCAGAAG
CGCATCCGCG AAGTGGTTGC CTGCGACAGC TACATCGGCG GCATGCTCGA CATGAGCGGC
GGCCACATCC ACCCGCTGAA CCTGGCCCTG GGTGAAGCTG CCGCGGTCGA GTCGCTGGGT
GGCATCATCT ATGAGCAAAC CCCGGCCGTG CGCATCGAAC GCGGTGCCAA CCCGGTCGTG
CATACCCCGC AGGGCAAGGT CCGCGCCAAG TTCATCATCG TTGCCGGCAA CGCCTACCTG
GGCAACCTGG TACCCGAGCT GGCCGCCAAG TCCATGCCAT GCGGCACGCA GGTGATCACC
ACCGAGCCAC TGGGCGAAGA ACTGGCACGC ACCCTGCTGC CGCAGGACTA CTGCGTCGAG
GACTGCAACT ACCTGCTCGA CTACTACCGC CTGACCAGCG ACAAGCGCCT GATTTTCGGT
GGCGGCGTGG TGTACGGCGC GCGTGACCCG GCCAACATCG AGGCGATCAT CCGCCCGAAA
ATGCTCAAGG CCTTCCCGCA GCTGAAGAAC GTGAAGATCG ACTACGCCTG GACCGGTAAC
TTCCTGCTGA CCTTGTCGCG CCTGCCACAG GTTGGCCGGA TTGGCGACAA CATCTACTAC
TCGCAGGGTT GCTCGGGCCA CGGCGTGACC TATACCCACC TGGCGGGCAA GGTGCTGGCC
GAGGCCCTGC GCGGCCAGGC AGAGCGTTTC GACGCCTTTG CCGGCCTGCC GCACTACCCG
TTCCCGGGTG GCCAGATGCT GCGCGTACCC TTCAGCGCCA TCGGTGCCTG GTACTACAGC
CTGCGCGATC GCCTGGGCTT CTGA
 
Protein sequence
MANTPYPQSY YAASANPVPP RPALQGEVET DVCIIGAGYT GLSSALFLLE NGFKVSIVEA 
AKVGFGASGR NGGQIVNSYS RDIDVIERTV GPKQAQLLGH MAFEGGRIIR ERVAKYNIQC
DLKDGGVFAA LTSKQMGHLE SQKRLWERFG HNQLELMDQK RIREVVACDS YIGGMLDMSG
GHIHPLNLAL GEAAAVESLG GIIYEQTPAV RIERGANPVV HTPQGKVRAK FIIVAGNAYL
GNLVPELAAK SMPCGTQVIT TEPLGEELAR TLLPQDYCVE DCNYLLDYYR LTSDKRLIFG
GGVVYGARDP ANIEAIIRPK MLKAFPQLKN VKIDYAWTGN FLLTLSRLPQ VGRIGDNIYY
SQGCSGHGVT YTHLAGKVLA EALRGQAERF DAFAGLPHYP FPGGQMLRVP FSAIGAWYYS
LRDRLGF