Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2435 |
Symbol | iscS-2 |
ID | 1045604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2781145 |
End bp | 2782362 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145858 |
Product | cysteine desulfurase |
Protein accession | NP_744583 |
Protein GI | 26989158 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCAGGTA CGCTTACGTC AATGATCGCC GATTTCACGG CCACTGACAC GGACCTGCCC TCAATGCCTA GCGCCCCACT CTACTTCGAT TACGCCGCCA CTACCCCCGT CGACGACCGG GTTATCGAAA CCATGCTCGC CTGCCTGGGT AACCAGGCCA ACTTCGGCAA CCCGGCGTCC AGCGGCCACG CCTTCGGCCA GGCTGCACGT CACGCCGTGG AGCAGGCGCG CCAGCAAGTC GCCGAGTGCG TCGGCGCGCA CGCCGAGCAG CTGGTATGGA CCTCGGGCGC GACCGAGTCC AACAACCTGG CGCTCAAGGG TATTGCCCAA GGCATCGGCC AGCCCGGACA CCTGATCACC AGCCAGCTGG AACACAAGGC CGTGCTCGAC ACCGTGGCCG AGCTGGAACG TCAGGGCTGG GCCGTCACCC GCCTGGCAGC GGATGCCGAT GGCCTGATCC AGCCTGCAAG TGTGCAGGCA GCGTTGCGCG CTGACACCCG CCTGGTATCG CTGATGGCGG TCAACAACGA ACTGGGCACG GTCACCGATT TTGCCGCGAT CGGCGAGCAG GTGCGTGCCC ACGGTGCCCT GCTGCACGTG GATGCCGCGC AGGCCGTGGG TAAGCTGGCT ATCGACCTGC GTACGATGGC CGTGGACCTG ATGTCTTTTT CGGCGCACAA GGTCTACGGG CCGAAAGGCA TCGGCGCGCT GTATGTCGGG CCGCGCGCTC GCGTGCTGAT GCGTGCGCAG ATGCACGGCG GCGGCCATGA GCAGGGCCTG CGTTCCGGCA CCCTGGCGAC CCATCAGATA GCGGGCATGG GCAGTGCCTT TGCCTTGGCC GGCCAACCTG GCGACAGCGA GCACCAGCGC CTTGAGCAAC TGGCAAGACG CCTGCGCACA GGCCTGCTGG CCATGCCTGG CGTTACCCTG AACGGCTGCG CTAAGCAACG CATTCCCCAT ACCTTGAACC TGTGCATCGA CAGCAAGGGC TTCAACAGCA CGGCGCTGGC CGGCGAGCTG GCCTTGTCGA CCACCTCGGC CTGCAACTCG GCGAGCAACG CTGCCTCGCA TGTGCTGCTG GCACTGGGGC TGGATGAGCG TCAGGCTCGC AACAGTGTGC GTTTGAGCAT CGGCCGTTTC AGCACCGAGG CGGACGTGGA CAAGGCACTC GACGTGTTTG GCCGGGTGCT GGCGGCAGCA TCGGCAGCAC TGTGGTGA
|
Protein sequence | MAGTLTSMIA DFTATDTDLP SMPSAPLYFD YAATTPVDDR VIETMLACLG NQANFGNPAS SGHAFGQAAR HAVEQARQQV AECVGAHAEQ LVWTSGATES NNLALKGIAQ GIGQPGHLIT SQLEHKAVLD TVAELERQGW AVTRLAADAD GLIQPASVQA ALRADTRLVS LMAVNNELGT VTDFAAIGEQ VRAHGALLHV DAAQAVGKLA IDLRTMAVDL MSFSAHKVYG PKGIGALYVG PRARVLMRAQ MHGGGHEQGL RSGTLATHQI AGMGSAFALA GQPGDSEHQR LEQLARRLRT GLLAMPGVTL NGCAKQRIPH TLNLCIDSKG FNSTALAGEL ALSTTSACNS ASNAASHVLL ALGLDERQAR NSVRLSIGRF STEADVDKAL DVFGRVLAAA SAALW
|
| |