Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2406 |
Symbol | aroE |
ID | 1045533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2749638 |
End bp | 2750486 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637145829 |
Product | shikimate 5-dehydrogenase |
Protein accession | NP_744554 |
Protein GI | 26989129 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC AAGCCATCCT CGCCGGCCTG ATCGGCCGCG GCATCCAACT GTCACGTACC CCGGCCCTGC ACGAACACGA AGGCGACGCC CAGGCCCTGC GCTACCTGTA CCGGCTGATC GACGCCGACC AGTTGCAACT GGACGACAGC GCCCTGCCCG GCCTGCTCGA AGCCGCGCAA CATACCGGTT TCACCGGGCT GAACATTACC TACCCGTTCA AGCAGGCGAT CCTGCCGTTG CTCGACGAGC TGTCCGACGA GGCCCGTGGT ATCGGCGCGG TAAACACCGT GGTGCTCAAG GACGGCAAGC GCGTCGGCCA CAACACCGAT TGCCTGGGCT TTGCCGAAGG CTTGCGCCGT GGCCTGCCCG ACGTTGCACG GCGCCAGGTG GTGCAGATGG GTGCCGGTGG CGCTGGCTCG GCCGTGGCCC ATGCCCTGCT GGGTGAAGGG GTAGAACGGC TGGTGCTGTT CGAAGTGGAT GCGACCCGTG CGCAGGCGTT GGTGGACAAC CTGAACACCC ATTTCGGCGC GGAGCGCGCC GTGCTTGGCA CCGACCTGGC CACAGCCTTG GCCGAAGCGG ACGGGCTGGT CAACACCACG CCGGTGGGCA TGGCCAAGCT ACCGGGCACG CCACTGCCGG TGGAGTTGTT GCATCCCCGC CTGTGGGTGG CAGAGATCAT CTACTTCCCG CTGGAGACCG AACTGCTGCG CGCGGCCCGG GCACTGGGCT GCCGCACGCT GGATGGCAGC AACATGGCGG TGTTCCAGGC GGTGAAGGCA TTCGAGCTGT TCAGCGGGCG GCAGGCGGAT GCGGCGCGGA TGCAGGCGCA CTTTGCCAGT TTCACCTGA
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Protein sequence | MSQQAILAGL IGRGIQLSRT PALHEHEGDA QALRYLYRLI DADQLQLDDS ALPGLLEAAQ HTGFTGLNIT YPFKQAILPL LDELSDEARG IGAVNTVVLK DGKRVGHNTD CLGFAEGLRR GLPDVARRQV VQMGAGGAGS AVAHALLGEG VERLVLFEVD ATRAQALVDN LNTHFGAERA VLGTDLATAL AEADGLVNTT PVGMAKLPGT PLPVELLHPR LWVAEIIYFP LETELLRAAR ALGCRTLDGS NMAVFQAVKA FELFSGRQAD AARMQAHFAS FT
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