Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2402 |
Symbol | |
ID | 1045529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2746479 |
End bp | 2747765 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637145825 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | NP_744550 |
Protein GI | 26989125 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATGGC CGCGCACCCT GGCCTCGCGT CTGGCGCTGA TCTTCTTCAC CGGCCTGGTG TTGGCTTATG GTCTGTCGTT CGGCCTGCAG GCCTACGAGC GCTATATCAG CAGCCGCTCG ATGATGCTCA GTAACCTCGA ACAGGACGTG GCGACCTCGG TTGCCATCCT TGACCGCCTG CCCGCAGCCG AGCGTGCCGC CTGGCTGCCA CGCCTGGAAC GGCGCACCTA CCGCTATCGC CTCGACCAGG GCTTGGCAGG CGAAGCGATG CCCAGCAGTG ACCCACCGAT GGCCGCCGCG TCGATCGTCA AGGCCATTGG CAGCGACTAC CGCCTGACCT TCCTGGAAAT CCCGGGGCCC AATGCGCACT TCCAGGCGCA CCTGAAGCTG GCCGACGGCG CGCCACTGAC CATCGACGTG ACGCCAGCAC CGGTCCCGGT AGCCCGTTGG TTGCCCGTGG TGCTGCTGAT TCAGCTGGCT GTGCTGTTGC TGTGTACCTG GCTGGCGGTA CGCCTGGCCA TCGGCCCGCT AACCCGTCTG GCCCAGGCAG TGGACAACCT CGACCCGGAC CAGCCCGGCG TTCAACTGGA TGAAAGCGGC CCACGCGAGG TGCGTTACGC TGCCGTGGCC TTCAACGCCC TGCAGGCGCG CATTGCTGCC CACCTCAAGG AACGCATGCA GTTGCTGGCG GCCATTTCCC ACGACCTGCA AACCCCGATC ACTCGCATGA AGTTGCGGGT CGAAGTGATG GATGAGGGGG TCGAAAGGGA CAAGTTCGGG AGCGACCTGG ATGAAATGGA ACACCTGGTG CGCGAAGGCG TGGCGTATGC CCGCAGCATG GACAGCAGCA CCGAAGCGAC CTGCCGGGTC AACCTTGATG CCTTTCTCGA CAGCCTGGTA TTCGACTACC AGGACAGCGG CGCCCAGGTC GAGCGCCACG GCAGCAGCGA TACCCTGCTG GAAACCCGCC CGCATGCGCT GCGCCGGGTA CTGGTGAACC TGGTCGACAA CGCCCTGAAG TTTGCAGGTG CTGCCGAGCT GCAAGTGTCG CGCGAGGGCA GTACCACCAT CATCCGCGTG CTCGACAACG GGCCAGGGAT ACCCGTTGAC GAACTGGATG AAGTGCTCAA GCCGTTCTAC CGGGTGGAGG GTTCACGCAA TCGCAGCACG GGTGGCACCG GCTTGGGCCT GGCCATTGCC CACCAGCTGA TCCGGGCCAT GGGGGGCCGG CTGACCCTGA GCAACCGCGA ACAGGGCGGA TTGTGCGCGC AGATCGAACT CACCTGA
|
Protein sequence | MKWPRTLASR LALIFFTGLV LAYGLSFGLQ AYERYISSRS MMLSNLEQDV ATSVAILDRL PAAERAAWLP RLERRTYRYR LDQGLAGEAM PSSDPPMAAA SIVKAIGSDY RLTFLEIPGP NAHFQAHLKL ADGAPLTIDV TPAPVPVARW LPVVLLIQLA VLLLCTWLAV RLAIGPLTRL AQAVDNLDPD QPGVQLDESG PREVRYAAVA FNALQARIAA HLKERMQLLA AISHDLQTPI TRMKLRVEVM DEGVERDKFG SDLDEMEHLV REGVAYARSM DSSTEATCRV NLDAFLDSLV FDYQDSGAQV ERHGSSDTLL ETRPHALRRV LVNLVDNALK FAGAAELQVS REGSTTIIRV LDNGPGIPVD ELDEVLKPFY RVEGSRNRST GGTGLGLAIA HQLIRAMGGR LTLSNREQGG LCAQIELT
|
| |