| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2395 |
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| Symbol | |
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| ID | 1045431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2737619 |
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| End bp | 2742112 |
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| Gene Length | 4494 bp |
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| Protein Length | 1497 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637145818 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | NP_744543 |
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| Protein GI | 26989118 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCA CTTTGCCGTC AGATGCGCAG GCCGCCATCG ATGCTTTCCA GGACGGCATC
ATCGGCAGGC GCCTGCCACC CTGGTTGCGT CATGCACCTG CTGAGCAACT GCCTGAGATC
GGCAGGGCAT TGTCAAACAG CCTTCGCTGC TGTGAGCAAG TGAACACGGT GCTGCGAGGT
ATCGAGGGCA TCGACAGTTT CGTCGCATCA GCCCTGGGAA AGGCCCTCGA CGAGCGTTAT
GGGCTTGGCC GTAACCCTTA CTCGCTCAGG TTTCTGGAGG GCCGCCGGGA AGCTGTGATC
AACAGTCAGC CGGTGGGCGC GCACCTGACG GCCGTGGTCT ATGAAGAAAA GCCGCTGCTC
GAAGTGGCAT TGCGCAACTT CACGGCCGCC CAGGCGCAGG AAGGTGGCCA GCCGCGCGGT
AACCGCCTGC TGCTTCCCCG CCACGGCACG GTCAAACCCC CTACAAGCAT CGAGTTTGCC
GGACTGTGTC GTGAGCTGGA CCTGGGTGAG CGCTATCAAC GTCATCTGGA TGCCATCCTC
ACGCCCGCTG GCAATGCCGA GCGCCTGGTG TCTCAGCTTG TAGATGCCAG GCGCTACACC
ATGCTTGTGG ACGCCTACAA AGCCAGGCAG GAGGGAACGC TGGATGCCAG CGAACTCAAT
GTGATGGTGG CTGTGTGCGA GAAGGGGGAG CTGCCGCGCC TGGCGGGCGA CCTTGTGCTG
GCCAGGCAAC TGAAATTGCT GGGTTGCCAG ATTGAGCAGG TCACCGTGTT CGTTGTCATT
GAGCAGGGCG TCCTGTTCAA CACGACGCGG CGGGTTTTGC TTTACGTGCC TGGGGACCCT
TTTTCGCCCT GGCGCGCGTT CGAGAGCGTC GACAAACTGA ACCGCGAACT GGGCCGTTGC
TTGCGAGACA AGGCCTATCA GCGTTTCTTC AGCCGCTTCG TGCTGCGGCG AGACAGCCAG
GCTTTTTTCG CCCAGGTCGC GGAGCGCTTC GATGACCTGC CGAGCTGGGC TTTCCGCGAT
CTCGAACCGC GCTTGCAGGC TTACCCGCAG CCGTTGTTCA TCAGCCTGGC ACAGGCACAT
ATCCACCAGA TCAAGGACGA TGCGGCGATG ATCGCGGTCC CCGTGGCCAG GCTGGATCGT
GAGGTTCAGC GCCAGCATGA CCTGCGCCTT GCCGCTGAAG GATGGGCGCT GCTCAACTTG
GCCAGTTTCT TTGTGCCTGG GGTTGGCCTG GCGCTGCTGG CCGTGACGGC CTGCGAACTG
CTGGGCGAGG TCTACCATGG CGTCGAGGCC TGGCAGGAAG GCGATCGCCA GGAGGCGCTC
GACCATTTGA CCCATGTGGC GACAGACCTT GCTGTGCTCG CGACCACGGT AGCCGGGGTG
GGTGTGGCTC GACGGGTTTG GGCACGCTCT GCGAAGGTCG ATGCCCTGGT GCCGGCTCGG
CTGGAGGACG GCACAGAGAA ACTCTGGCAA CAAGACGTGA CTCCGTTTCA AAGCCAGGCA
CCCGTTGCAG CCTTAAGCCC GGACGCCTTG GGTATTCGGC ATCAGGACGG GCTGGCCTGG
ATCGAAATGG ACGGGCATCA CTATCGCGTG ACAGAGGCGG GTGATGATCA ATGGCAGTTG
TATCCGGTCG ACGGCCACGG GCCGTTGCTG CGTCATAACG GCTCTGGTGC CTGGCGATTG
TGGTGCGAGC AACCGGCTCG ATGGACCGAC AGATACCGCA TGTTCCGGCG TCTGGGCGAG
CCCTTCAGTG GGCTGAATGA CGAACAGATC GATCAGGTTC TGCTGTTCCA CGGCCTTGAT
GGCGACGACC TGCGTGGCCT GCATGTACAC GCCCAGGCAC CGAGCCCCGG GATGATCGAC
AGCGTGGCGC GGGTCAGGCT TGATCAACGC ATCCGCAGCA TGATTGGCCG TCTGCGCAGC
GGCGAGCCGG TAGCAGATAC AACAGTGCTC GATCACGCTC GGCGCCTGCC AGGTGCGAGT
GGCCTGACAG ATCAGGCACT GGCCGCGTTG GCCTGGACGC AGCGCCGAAC ACTGCTGCAG
CACCTTTTCG AAGCCTTGCA GCCCAGCGAC ACCCCCGGCA GCGCGGCGCT GCGCCGGGTG
TTCCCGGGGC TGAGCGCGCG CACTGCGCAA GCACTGGTAC AGGCCGCCAG CAGCGTTGAT
CGCATGCGGC TGCTGTCCAG CGGAAGGGTT GCACTGGGGC TGGCCGAGGC GGCAAGGGGC
AGCGTGCTGG CTACCCGCCA GGCTCGGGTA TTTGAAGCGT TGTACCTTGA TACGCCGCAG
CATGCAGACC TGGCACGGGT GGCCTTGGGC TTGTTGCGGT ATCTACCCGG AAGCGAACAA
GGTGTGCGCT GGCGCCTGTA CGAAGGCTCC CTGGGCGGGC CGATACTGGC GAAGACCGAG
CAAGGGCCGC GGGCGTTCGA TCTGGTGCAC GTCAACGGTA GGTTTCAACT GCATGGCAGC
CAGGGCACGG CGCTGGGTGA GGCAGGCGAG TTGTTCGATG TCATGGCGTC AGCCTATACC
GAAGCGCAAC GGCAGGCGAT GGGGATCGGC GATCCATTCG CGCACAACCT CAGGGTGATA
CTGGCGCGCG AAGCGGCACG CCATCGTGAT GAGATCAGTC GTTTGCTTGG CGCGGTACGC
CCAGGTGCTG CCCGAGGGCC CATGCGCTTG GCCGATGGAC GTATTGGCTA TCCGCTGGGT
GGTGGCGGAG TAGGGGGTTT TGCATCAAGG GGGAGTGCCC TGAGGGCAAC GCTGCGCGAT
CTCTTTCCGT GGTTGAGTGA TGAGCAGGTC GAGACCTTCG CCGATGACGC CAGGCGTTCA
GGGCATCAGA TTGAACACGT ACTGGCTGAC CTTCGCAATG AGTTCGCCAT CCTGCGCATG
ACACTGAATA CCTGGGTGGC ACGAGGGCAG GGCGATGTCA GGGAAGATCG AGAGGCTCTA
CGCCAGACGT TGTTCAATTG CTGGCGGCGG TCGGTGGGCG TGGGGGAACT GCAAATCAAT
GCACAGGAAA ACCTCCACGT CATGTTCTGC AATTTCAGAT CGAGCGGCTT GCCCAACATA
CCCCCACAGG TCAGCTTCAG AGGTGTGACC AGCCTGTCGC TGCTGCACCT TGACCTTCTG
GAGGTGCCCA GCAGCCTATT GCTGGCTTTC CCTAACCTGC AAACCCTCGA TCTGGGAGGG
AACCTGTTGA CGCGCCTTCC GCAGCCGTTG CTGCAGATAG CGCAGCTGCG GCATCTGAGC
CTGACCAACA ACCGGATCGT CCTGAACATC GCACAAACCG CCACACTGGC CAGTTGCACG
AGCCTGCAGT CTCTCGACCT GTCCCACAAC CCCCTGGGGA GCCGGTTCAC GTTGGCGGGT
TTGGCTGAAT TGCGTTGGCT GAACTTGCGC GACACACAGA TCTCGCAGTT TCCACTGGGC
GTGTTCGACA ACGCTCAGTT GGTATCCATT GACTTGCGGG ATAACCGGAT CAGACACATT
CCAGAGGGTT TCTACCAGTT GCCCGTGTGG CAGCGGCGGC GGTTCCGCTT GAATGCGAAC
CCCTTGGGCG AGGCCCAGAC GTTACGCTTG CAGGCTTCGT TGAGCAGCGA CGATCCTGCC
CTCGACGAGG AGCAAGTGCT TCTGCGGCTG CAGCACGCGC GTGAAGTATG GGGGGATGCC
GTGGCCCCGG AGCATCGCGG CTTGATGCTT GCTGCCTGGG ACTCGCTGGA TTCAGGGCAG
GACGCCGAGC GTTTTTTCCG GGTGCTTCGC CAGTTGTTGC TGTCCGAAGA CTTTCGTGTC
AATGCGCGTG CACTGGGCAA TCGGGTCATG GCGGTACTGC AGGCGATGGC CATTACGCCA
GAGCTGCGGC AGAACTTGCT GTCGGTGGCC AATGATGAGT GGGGGTGCCA GGACGGTGCA
ACCTGGTGCT TGAGTAACCT TGAACTGAAC TTGCTGGTTT GGCAGGTTGA GCACGCGGCT
CAAGGAGAAA GCGAACGCGC TTTGCTAGAC CTGGGCAGGC GTTTATGGCG CCAGGATGCA
GTAGACCTGT TCGCTACCCG ATGGGCGCTA CAGCATGGCA GGGCGCTGGA AGGAAGCGAG
GTGGGGTTGG CTTTCAGGAT CGGGCTGAGG GAGTGTCTCG ACCTGCCATT GCAGGTGGGA
GAAATGAGCT TTCTTGCGAT CTCAGGCGTT CTGGATGCGG ACCTTGCACA AGCAGAGGCT
GCGGTGCGGG ATGCAGAAAC CCCGGAAGAG GTTGCCCGCT CCATGGTTGA CCGTGAATTC
TGGCAGGCGC ATCTGGAACG TTCCCACCCT GAGCGATTCG CTGCGGTCGA CCTGCCGTTC
AGAAGGCAGC TTGAAAGGGT CCTTGACGAC GAAGCGCTGA GCGAAGGGGC CATGATCGAC
CAGGCGGATG CCATTCGTGA TGCTCAGCGC GCTGCACGCA GAGGGCTGAT GCTGGATATG
ACGATTCAAG CGATGGAAAT GGGACCCAAG GGGCCATCGA TCGATGTACG TTGA
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| Protein sequence | MDTTLPSDAQ AAIDAFQDGI IGRRLPPWLR HAPAEQLPEI GRALSNSLRC CEQVNTVLRG
IEGIDSFVAS ALGKALDERY GLGRNPYSLR FLEGRREAVI NSQPVGAHLT AVVYEEKPLL
EVALRNFTAA QAQEGGQPRG NRLLLPRHGT VKPPTSIEFA GLCRELDLGE RYQRHLDAIL
TPAGNAERLV SQLVDARRYT MLVDAYKARQ EGTLDASELN VMVAVCEKGE LPRLAGDLVL
ARQLKLLGCQ IEQVTVFVVI EQGVLFNTTR RVLLYVPGDP FSPWRAFESV DKLNRELGRC
LRDKAYQRFF SRFVLRRDSQ AFFAQVAERF DDLPSWAFRD LEPRLQAYPQ PLFISLAQAH
IHQIKDDAAM IAVPVARLDR EVQRQHDLRL AAEGWALLNL ASFFVPGVGL ALLAVTACEL
LGEVYHGVEA WQEGDRQEAL DHLTHVATDL AVLATTVAGV GVARRVWARS AKVDALVPAR
LEDGTEKLWQ QDVTPFQSQA PVAALSPDAL GIRHQDGLAW IEMDGHHYRV TEAGDDQWQL
YPVDGHGPLL RHNGSGAWRL WCEQPARWTD RYRMFRRLGE PFSGLNDEQI DQVLLFHGLD
GDDLRGLHVH AQAPSPGMID SVARVRLDQR IRSMIGRLRS GEPVADTTVL DHARRLPGAS
GLTDQALAAL AWTQRRTLLQ HLFEALQPSD TPGSAALRRV FPGLSARTAQ ALVQAASSVD
RMRLLSSGRV ALGLAEAARG SVLATRQARV FEALYLDTPQ HADLARVALG LLRYLPGSEQ
GVRWRLYEGS LGGPILAKTE QGPRAFDLVH VNGRFQLHGS QGTALGEAGE LFDVMASAYT
EAQRQAMGIG DPFAHNLRVI LAREAARHRD EISRLLGAVR PGAARGPMRL ADGRIGYPLG
GGGVGGFASR GSALRATLRD LFPWLSDEQV ETFADDARRS GHQIEHVLAD LRNEFAILRM
TLNTWVARGQ GDVREDREAL RQTLFNCWRR SVGVGELQIN AQENLHVMFC NFRSSGLPNI
PPQVSFRGVT SLSLLHLDLL EVPSSLLLAF PNLQTLDLGG NLLTRLPQPL LQIAQLRHLS
LTNNRIVLNI AQTATLASCT SLQSLDLSHN PLGSRFTLAG LAELRWLNLR DTQISQFPLG
VFDNAQLVSI DLRDNRIRHI PEGFYQLPVW QRRRFRLNAN PLGEAQTLRL QASLSSDDPA
LDEEQVLLRL QHAREVWGDA VAPEHRGLML AAWDSLDSGQ DAERFFRVLR QLLLSEDFRV
NARALGNRVM AVLQAMAITP ELRQNLLSVA NDEWGCQDGA TWCLSNLELN LLVWQVEHAA
QGESERALLD LGRRLWRQDA VDLFATRWAL QHGRALEGSE VGLAFRIGLR ECLDLPLQVG
EMSFLAISGV LDADLAQAEA AVRDAETPEE VARSMVDREF WQAHLERSHP ERFAAVDLPF
RRQLERVLDD EALSEGAMID QADAIRDAQR AARRGLMLDM TIQAMEMGPK GPSIDVR
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