Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2378 |
Symbol | yhgI |
ID | 1045411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2718871 |
End bp | 2719455 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637145802 |
Product | yhgI protein |
Protein accession | NP_744527 |
Protein GI | 26989102 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [S] Function unknown |
COG ID | [COG0316] Uncharacterized conserved protein [COG0694] Thioredoxin-like proteins and domains |
TIGRFAM ID | [TIGR03341] IscR-regulated protein YhgI |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0102502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCTA TAACCATTAC CGACGCCGCC CATGACTACC TGGCCGATCT GCTCTCCAAG CAGAATACGC CCGGCATCGG CATTCGCATT TTCATCACCC AGCCGGGCAC CCAGTACGCC GAGACGTGCA TCGCCTACTG CAAGCCGGGC GAAGAGAAGC CTGACGACAC CGCCGTGGGT CTGAAAAGCT TCACTGCTTA CCTTGACGCC GTCAGCGTAC CCTTCCTGGA AGACGCGCTG GTCGACTACG CCACCGACCG CATGGGTGGC CAGCTGACCA TCAAGGCGCC AAACGCCAAG GTGCCGATGG TCAACGAAGA CAGCCCGATC AACGAACGTA TCAACTACTA CCTACAGACC GAGATCAACC CCGGCCTGGC CAGCCATGGC GGCCAGGTGA GCCTGGTGGA CGTGGTCGAT GACGGCATTG CCGTACTGCA GTTCGGTGGT GGCTGCCAGG GTTGCGGCCA GGCCGATGTC ACCCTGAAGG AAGGCATCGA GCGCACCCTG CTCGAGCGTA TTCCGGAGCT GAAGGGCGTG CGCGACGTGA CTGACCACAG CCAGAAAGAA AACGCCTACT ACTGA
|
Protein sequence | MSAITITDAA HDYLADLLSK QNTPGIGIRI FITQPGTQYA ETCIAYCKPG EEKPDDTAVG LKSFTAYLDA VSVPFLEDAL VDYATDRMGG QLTIKAPNAK VPMVNEDSPI NERINYYLQT EINPGLASHG GQVSLVDVVD DGIAVLQFGG GCQGCGQADV TLKEGIERTL LERIPELKGV RDVTDHSQKE NAYY
|
| |