Gene PP_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2378 
SymbolyhgI 
ID1045411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2718871 
End bp2719455 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content61% 
IMG OID637145802 
ProductyhgI protein 
Protein accessionNP_744527 
Protein GI26989102 
COG category[O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID[TIGR03341] IscR-regulated protein YhgI 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0102502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTA TAACCATTAC CGACGCCGCC CATGACTACC TGGCCGATCT GCTCTCCAAG 
CAGAATACGC CCGGCATCGG CATTCGCATT TTCATCACCC AGCCGGGCAC CCAGTACGCC
GAGACGTGCA TCGCCTACTG CAAGCCGGGC GAAGAGAAGC CTGACGACAC CGCCGTGGGT
CTGAAAAGCT TCACTGCTTA CCTTGACGCC GTCAGCGTAC CCTTCCTGGA AGACGCGCTG
GTCGACTACG CCACCGACCG CATGGGTGGC CAGCTGACCA TCAAGGCGCC AAACGCCAAG
GTGCCGATGG TCAACGAAGA CAGCCCGATC AACGAACGTA TCAACTACTA CCTACAGACC
GAGATCAACC CCGGCCTGGC CAGCCATGGC GGCCAGGTGA GCCTGGTGGA CGTGGTCGAT
GACGGCATTG CCGTACTGCA GTTCGGTGGT GGCTGCCAGG GTTGCGGCCA GGCCGATGTC
ACCCTGAAGG AAGGCATCGA GCGCACCCTG CTCGAGCGTA TTCCGGAGCT GAAGGGCGTG
CGCGACGTGA CTGACCACAG CCAGAAAGAA AACGCCTACT ACTGA
 
Protein sequence
MSAITITDAA HDYLADLLSK QNTPGIGIRI FITQPGTQYA ETCIAYCKPG EEKPDDTAVG 
LKSFTAYLDA VSVPFLEDAL VDYATDRMGG QLTIKAPNAK VPMVNEDSPI NERINYYLQT
EINPGLASHG GQVSLVDVVD DGIAVLQFGG GCQGCGQADV TLKEGIERTL LERIPELKGV
RDVTDHSQKE NAYY