Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2368 |
Symbol | dkgB |
ID | 1045398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2701833 |
End bp | 2702636 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145792 |
Product | 2,5-diketo-D-gluconate reductase B |
Protein accession | NP_744517 |
Protein GI | 26989092 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTC CTTCCTTCGG CCTCGGCACC TTCCGCCTCA CCGGCCAAAC CGTCATCGAC TCGGTCAAGT CTGCCCTGGC AGTCGGCTAC CGTGTCATCG ATACCGCACA GATCTACAAG AACGAAGCCG AAGTCGGCCA GGCCATCGCC GAAAGCGGCG TGCCGCGCAG CGAGCTGTTC ATCACCACCA AGATCTGGGT CGACAACTAC GCCGCCGACA AGCTGATCCC CAGCCTGCGT GACAGCTTGC AGAAACTGCG CACCGACTAC GTCGACCTGC TGCTGATCCA CTGGCCAGCG CCGGGCAACG GCGTAGAACT GCCCGAGTAC ATGAAGGCCC TGGCCGACGC CAAGCAGCAA GGCCTGGCTC GCCAGATCGG CGTTTCCAAC TTCAACATCG AGCTGACCAG GCAAGCCATT GCCGTGGTCG GCAAAGGGGA AATCGCCACC AACCAGATCG AGCTCAGCCC CTATCTGCAG AACAGCAAGC TGACCGCGTT CCTCAAGGAA CAAGGGATCA CCGTGACCTC GTACATGACC CTGGCCTACG GCAAAGTGCT AAAAGACCCG GTACTGGCCC AGATCGCCGC CAAGCACAAG GCTACCGTCG CCCAGGTTGC CCTGGCCTGG GCCCTGCAAC TGGGCTATGC CGTGATCCCG TCGTCGACCA AGCGTGAAAA CCTGGCCAGC AACCTGCTTG CCCGTGGCCT GACGCTGGAC ACCGACGACA TGGCACGCAT CGCCAAGCTG GAGCGCAACG GCCGCGAGGT CAGCCCTGAC GGCCTGGCGC CAACCTGGGA CTGA
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Protein sequence | MSVPSFGLGT FRLTGQTVID SVKSALAVGY RVIDTAQIYK NEAEVGQAIA ESGVPRSELF ITTKIWVDNY AADKLIPSLR DSLQKLRTDY VDLLLIHWPA PGNGVELPEY MKALADAKQQ GLARQIGVSN FNIELTRQAI AVVGKGEIAT NQIELSPYLQ NSKLTAFLKE QGITVTSYMT LAYGKVLKDP VLAQIAAKHK ATVAQVALAW ALQLGYAVIP SSTKRENLAS NLLARGLTLD TDDMARIAKL ERNGREVSPD GLAPTWD
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