Gene PP_2367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2367 
Symbol 
ID1045396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2700640 
End bp2701827 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content66% 
IMG OID637145791 
Productmajor facilitator family transporter 
Protein accessionNP_744516 
Protein GI26989091 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTC AAACAATGAG ACCCGGCCGC GTGCTCTTCG CGTTGGCCAT TGGTGCCTTT 
GGCATCGGCA CTACCGAGTT CACCCCGATG GGGCTGCTGC CGGTCATCGC CCAGGGCGTG
GAGGTGAGCA TCCCCAGCGC CGGCATGCTG ATCACCGCCT ATGCCATTGG CGTGATGGTC
GGCGCGCCGA TCATGACCCT GCTGTTCAGC CGCTTTGGGA AGCGCGCTGC GCTGATGGCG
CTGATGGCCA TCTTCACCCT TGGCAACCTG CTGTCGTCAC TGTCGCCGGA CTACTACACC
CTGCTCGCCT CGCGACTGGT CACCAGCCTC AACCATGGTG CGTTCTTCGG TCTGGGAGCC
GTGGTGGCAG CCAGCGTGGT GCCCAAGGAG AAACAGGCCA GCGCCGTGGC CACCATGTTC
ATGGGCCTGA CGATCGCCAA CATCGGCGGC GTGCCGGCCG CCACCTGGAT CGGCCAGCAG
ATTGGCTGGC GCATGGCATT TGCCGGTACC GCCGTACTCG GCCTGCTGGC CATGGCCGCA
CTGTGGTACG CCCTGCCCAA GGGTGAACGC GGCAGCGTGC CGCATGTGCG CAAGGAACTG
GCGGTCATTG CCCGCCCCAG CGTGCTGCTG GCAATGGCCA CCACCGTGCT CGGTGCCGGT
GCCATGTTCA CCTTGTACAC CTACGTGGCG CCGGTGCTGG CCGAACTGAC CGGTGCCTCG
GACGGCTTCG TAACCTTGGG ACTGGTACTG ATCGGGGTTG GCTTCACCCT TGGCAACAGC
CTGGGTGGCC GCCTGGCCGA CTGGTCGCTG GATGGCGCGG CGAAGATCTT CCTCGCCGTG
CTGGCGCTGA TCATGCTGGC GATGCCCCTG GTACTGGGTA GCCACATCGG CGCTGCCATC
GCCCTGCTGG TCTGGGGCAT GTTCACCTTC GCCGTGGTAC CGCCGCTGCA AATGCGCGTC
ATGACTGCCG CCATCGAGGC GCCAGGCCTG GCGTCGTCGA TCAACGTGGG TGCGTTCAAC
CTGGGTAACG CCGTGGGCGC GGCGCTGGGT GGTGCGGTTA TCAGCCTGAA CCTGGGCTAC
GCCGCCGTGC CGATGGCCGG AGGTGTGCTG GCAGCTGCGG GGCTGTTGCT GGTATGGCTG
GGCGGGCGCC ACAAGGTCGC CGGCAAGACC GCAGCCGATA TGGCCTGA
 
Protein sequence
MTAQTMRPGR VLFALAIGAF GIGTTEFTPM GLLPVIAQGV EVSIPSAGML ITAYAIGVMV 
GAPIMTLLFS RFGKRAALMA LMAIFTLGNL LSSLSPDYYT LLASRLVTSL NHGAFFGLGA
VVAASVVPKE KQASAVATMF MGLTIANIGG VPAATWIGQQ IGWRMAFAGT AVLGLLAMAA
LWYALPKGER GSVPHVRKEL AVIARPSVLL AMATTVLGAG AMFTLYTYVA PVLAELTGAS
DGFVTLGLVL IGVGFTLGNS LGGRLADWSL DGAAKIFLAV LALIMLAMPL VLGSHIGAAI
ALLVWGMFTF AVVPPLQMRV MTAAIEAPGL ASSINVGAFN LGNAVGAALG GAVISLNLGY
AAVPMAGGVL AAAGLLLVWL GGRHKVAGKT AADMA