Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2367 |
Symbol | |
ID | 1045396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2700640 |
End bp | 2701827 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145791 |
Product | major facilitator family transporter |
Protein accession | NP_744516 |
Protein GI | 26989091 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTC AAACAATGAG ACCCGGCCGC GTGCTCTTCG CGTTGGCCAT TGGTGCCTTT GGCATCGGCA CTACCGAGTT CACCCCGATG GGGCTGCTGC CGGTCATCGC CCAGGGCGTG GAGGTGAGCA TCCCCAGCGC CGGCATGCTG ATCACCGCCT ATGCCATTGG CGTGATGGTC GGCGCGCCGA TCATGACCCT GCTGTTCAGC CGCTTTGGGA AGCGCGCTGC GCTGATGGCG CTGATGGCCA TCTTCACCCT TGGCAACCTG CTGTCGTCAC TGTCGCCGGA CTACTACACC CTGCTCGCCT CGCGACTGGT CACCAGCCTC AACCATGGTG CGTTCTTCGG TCTGGGAGCC GTGGTGGCAG CCAGCGTGGT GCCCAAGGAG AAACAGGCCA GCGCCGTGGC CACCATGTTC ATGGGCCTGA CGATCGCCAA CATCGGCGGC GTGCCGGCCG CCACCTGGAT CGGCCAGCAG ATTGGCTGGC GCATGGCATT TGCCGGTACC GCCGTACTCG GCCTGCTGGC CATGGCCGCA CTGTGGTACG CCCTGCCCAA GGGTGAACGC GGCAGCGTGC CGCATGTGCG CAAGGAACTG GCGGTCATTG CCCGCCCCAG CGTGCTGCTG GCAATGGCCA CCACCGTGCT CGGTGCCGGT GCCATGTTCA CCTTGTACAC CTACGTGGCG CCGGTGCTGG CCGAACTGAC CGGTGCCTCG GACGGCTTCG TAACCTTGGG ACTGGTACTG ATCGGGGTTG GCTTCACCCT TGGCAACAGC CTGGGTGGCC GCCTGGCCGA CTGGTCGCTG GATGGCGCGG CGAAGATCTT CCTCGCCGTG CTGGCGCTGA TCATGCTGGC GATGCCCCTG GTACTGGGTA GCCACATCGG CGCTGCCATC GCCCTGCTGG TCTGGGGCAT GTTCACCTTC GCCGTGGTAC CGCCGCTGCA AATGCGCGTC ATGACTGCCG CCATCGAGGC GCCAGGCCTG GCGTCGTCGA TCAACGTGGG TGCGTTCAAC CTGGGTAACG CCGTGGGCGC GGCGCTGGGT GGTGCGGTTA TCAGCCTGAA CCTGGGCTAC GCCGCCGTGC CGATGGCCGG AGGTGTGCTG GCAGCTGCGG GGCTGTTGCT GGTATGGCTG GGCGGGCGCC ACAAGGTCGC CGGCAAGACC GCAGCCGATA TGGCCTGA
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Protein sequence | MTAQTMRPGR VLFALAIGAF GIGTTEFTPM GLLPVIAQGV EVSIPSAGML ITAYAIGVMV GAPIMTLLFS RFGKRAALMA LMAIFTLGNL LSSLSPDYYT LLASRLVTSL NHGAFFGLGA VVAASVVPKE KQASAVATMF MGLTIANIGG VPAATWIGQQ IGWRMAFAGT AVLGLLAMAA LWYALPKGER GSVPHVRKEL AVIARPSVLL AMATTVLGAG AMFTLYTYVA PVLAELTGAS DGFVTLGLVL IGVGFTLGNS LGGRLADWSL DGAAKIFLAV LALIMLAMPL VLGSHIGAAI ALLVWGMFTF AVVPPLQMRV MTAAIEAPGL ASSINVGAFN LGNAVGAALG GAVISLNLGY AAVPMAGGVL AAAGLLLVWL GGRHKVAGKT AADMA
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