| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2362 |
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| Symbol | csuD |
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| ID | 1045390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2693707 |
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| End bp | 2696100 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145786 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | NP_744511 |
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| Protein GI | 26989086 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.768373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.836165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGCA GGGGCCAGGG AGGACCCGGC AATGGTTGGA AACCGTGTGT GAAATGGCTC
CCGGCGACGA CGTGCCGCTG GTGCCTGGGG CTGGCCATGG TCAGCCCCGC GCTGGTACTG
GCCGACGACT TGCCCCCACC GCCCACGGAG ATGTCCGCCA TCGCCGAGGC CACCCTTTAC
CTCGACCTGG TGGTGAACCA GATGCCCAGG GTTGACCTGA TACCGGTGCA GCAGCGGGCC
GGGCGGTTGT ACCTGGACAG CGACGTATTG CGTGCAGCCG GCGTCTCGCT GCCGGGCAAC
CCCCAGGGGG AGGTGGCCCT GGACAGCATC GCGGGGCTGC ACACCGACTA CGACAGTCAG
AACCAGCGCC TGCTGCTGCA GGTGCCGCCA GCCTGGTTGC CAGAACAGCA AGTGGGTGAT
CGCAACCTTT ACCCGGCCAG CGATGCGCGC AGCAGTTTCG GCGCCTTGTT CAACTACGAC
CTGTATATCA ACGACACCGA TGAAGGCGGT ACCTACCTGG CCGCCTGGAA CGAGCTGCGC
CTGTTCGACA GCTGGGGTAC CTTTTCCAGT ACCGGGCAGT GGCGTCAGTC TTTCAAGGGC
GCACAGGCGG ACGATACCCG CCGTGGCTTC ATGCGTTACG ACACCACCTG GCGCTTTACA
GACGAGCAGC GCCTGCTGAC CTACGAAGCC GGTGACTTCG TGACGGGCGC CTTGCCCTGG
AGCAGTTCGG TACGGGTGGG CGGAGTGCAG CTGTCACGCG ACTTCGCGGC GCGTCCGGAT
CTTGTCACTT ACCCGTTGCC TGCGTTCGCC GGCGAAGCGG CGGTGCCGAC GTCGCTCGAC
CTGTTCATCA ACGGTTTCAA GTCCAGCACC ACTGAACTGC AGCCAGGCCC GTACACCCTC
ACCAACGTGC CGTTCATCAA CGGTGTCGGG GAGGCGGTGG TGGTCACCAC TGATGCCCTT
GGCCGGCAGG TGTCGACCAC CTTGCCGTTC TACGTCACCA GCAGCCTGCT GCAGAAGGGC
CTGTCGGACT ACTCGGTGGC CGCCGGCAGC CTGCGCCGTG ATTACGGTGT ACGCGATTTC
AGCTATGGGC CGGGTATTGC CTCGGGCAGC CTGCGCTATG GGCTCAGTGA CATGTTCACC
CTGGAAACCC ACGCCGAAAC GGCGGAGTCG CTGATGCTGG GTGGGCTGGG CGGCAACATG
CGCGTGGGCA ACTTCGGCGT GCTCAACGCT GCCTTGGCGC AAAGCCGGTT CGAGGGCGAC
AAGGGCCACC AGGTCGCCCT TGGCTACCAA TACAACAGCC AGCGCATCGG CTTCGGTTAC
CAACGCCTGC AACGCCATGG CGATTATGCC GACCTGAGCC GGGTGGTCTC CCCGGACATG
CAACTGAGCA AAAGCAGCGA ACAGGTCACC CTCAGTGTCA ACCTGAACGA GTACGGCAGC
ATTGGCGCTG GCTACTTCGA TGTGCGCGCC GGTGACGGTA CGCGTACCCG GTTGATCAAC
CTGAGCTACA GCAAGCCGCT GTGGGGCAGC AGCAGTGTGT ACCTCTCGGC CAACCGTGAA
GTGGGGGACA GCCAGTGGGC GGTGCAGGCG CAGCTGGTGA TCCCGTTCGA CCTGCACGGC
ACCCTGGCGC TGAGCATGGA ACGCAGCAAT GAAGGCGAGA CCCTGCAACG GGTCAACTAC
AGCCGTGCGG TGCCAGCCGG TGTCGGCGTC GGTTACAACC TGGGCTATGC CGCAGGCAGC
GACCGTGATG CCTATCGCCA GGCCGACGTC ACCTGGCGCC TGCAATCGGT GCAATTGCAG
GCCGGTACGT ATGGCAGCAG CGGCGAGATG ACCCGCTGGG CCGACGCCAG TGGTTCTCTG
GTGTGGATGG ATGCCGGCGT GTTCGCTGCC AACCGTATCG ATGATGCCTT CGTGGTGGTC
AGCACCGCAG GTTACGCCGA TGTGCCGGTG CGTTATGAAA ACCAGGAAAT CGGCCGTACC
GATGCCAAGG GGCACTTGCT GGTGCCTTAC AGCAGTGGTT ACTACCGGGG CAAGTACGAG
ATCGACCCCA TGAACCTGCC ACCGGATGTC CTCGCACCGG ACGTTGAGCA GCGTGTGGCG
GTACGACGGG GCAGCGGTTA CTTGCTGGAG TTCCCCCTCA AGCGCGTCAT GGCGGCCAGT
GTCGAATTGG TGGATGGCAA CCAGCAGGTG CTCAAACTGG GTAGCCGTGT CACCCACGCA
GAGAGTGGCA CCCAGGCGGT GGTGGGGTGG GACGGGTTGG TGTACCTGGA GAACCTGTCG
TCGCATAACC GCCTTCAGGT GGCGCTTGAA GGGGGTGGGC ATTGCGAAGT GGCGTTCGAC
CTGCCCGAAG CGCAAGGCTC GGTCCCTTTG ATTGGTCCGT TGGTGTGCCG ATGA
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| Protein sequence | MKCRGQGGPG NGWKPCVKWL PATTCRWCLG LAMVSPALVL ADDLPPPPTE MSAIAEATLY
LDLVVNQMPR VDLIPVQQRA GRLYLDSDVL RAAGVSLPGN PQGEVALDSI AGLHTDYDSQ
NQRLLLQVPP AWLPEQQVGD RNLYPASDAR SSFGALFNYD LYINDTDEGG TYLAAWNELR
LFDSWGTFSS TGQWRQSFKG AQADDTRRGF MRYDTTWRFT DEQRLLTYEA GDFVTGALPW
SSSVRVGGVQ LSRDFAARPD LVTYPLPAFA GEAAVPTSLD LFINGFKSST TELQPGPYTL
TNVPFINGVG EAVVVTTDAL GRQVSTTLPF YVTSSLLQKG LSDYSVAAGS LRRDYGVRDF
SYGPGIASGS LRYGLSDMFT LETHAETAES LMLGGLGGNM RVGNFGVLNA ALAQSRFEGD
KGHQVALGYQ YNSQRIGFGY QRLQRHGDYA DLSRVVSPDM QLSKSSEQVT LSVNLNEYGS
IGAGYFDVRA GDGTRTRLIN LSYSKPLWGS SSVYLSANRE VGDSQWAVQA QLVIPFDLHG
TLALSMERSN EGETLQRVNY SRAVPAGVGV GYNLGYAAGS DRDAYRQADV TWRLQSVQLQ
AGTYGSSGEM TRWADASGSL VWMDAGVFAA NRIDDAFVVV STAGYADVPV RYENQEIGRT
DAKGHLLVPY SSGYYRGKYE IDPMNLPPDV LAPDVEQRVA VRRGSGYLLE FPLKRVMAAS
VELVDGNQQV LKLGSRVTHA ESGTQAVVGW DGLVYLENLS SHNRLQVALE GGGHCEVAFD
LPEAQGSVPL IGPLVCR
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